KEGG   Helicobacter pylori OK113: HPOK113_0895
Entry
HPOK113_0895      CDS       T02510                                 
Symbol
vacA
Name
(GenBank) vacuolating cytotoxin A
  KO
K11028  vacuolating cytotoxin
Organism
hpyo  Helicobacter pylori OK113
Pathway
hpyo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpyo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPOK113_0895 (vacA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hpyo02000]
    HPOK113_0895 (vacA)
   02044 Secretion system [BR:hpyo02044]
    HPOK113_0895 (vacA)
   02042 Bacterial toxins [BR:hpyo02042]
    HPOK113_0895 (vacA)
Transporters [BR:hpyo02000]
 Other transporters
  Pores ion channels [TC:1]
   HPOK113_0895 (vacA)
Secretion system [BR:hpyo02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   HPOK113_0895 (vacA)
Bacterial toxins [BR:hpyo02042]
 Type III toxins: Intracellular toxins
  Others
   Vacuolating cytotoxin
    HPOK113_0895 (vacA)
 Type II toxins: Membrane damaging toxins
  Pore-forming toxins, Other
   HPOK113_0895 (vacA)
SSDB
Motif
Pfam: VacA
Other DBs
NCBI-ProteinID: BAM96803
LinkDB
Position
948241..951717
AA seq 1158 aa
MDMKDAVGTYKLSGLRNFTGGDLDVNMQKATLRLGQFNGNSFTSFKDSADRTTRVDFNAK
NISIDNFLEINNRVGSGAGRKASSTVLTLQASEGITSGKNAEISLYDGATLNLASNSVKL
MGNVWMGRLQYVGAYLAPSYSTINTSKVTGEVNFNHLTVGDRNAAQAGIIASKKTYIGTL
DLWQSAGLNIIAPPEGGYKDKPNNTNSQSGAKNDKNESAKNDKQDSNTQVINPPNSGQKT
EIQPTQVIDGPFAGAKDTVVNISRINTNADGTIKVGGYTASLTTNAANLNIGKGGVNLSN
QASGRSLLVENLTGNITVDGALMVNNQVGGYALAGSSANFEFKAGVDTKNGTIAFNNNIS
LGRFVNLKASAHTVNFKDIDTGNGGFNTLDFSGVTNKVNINKLITASTNVAVKNFNINEL
LVKTNGISVGEYTNFSEDIGNQSRINTVRLETGTRSIYSGGVKFKGGEKLVINDFYYAPW
NYFDARNIKNVEITNKLAFGPQGSPWGTSKLMFNNLTLGPNAVMDYSQFSNVTISGNFVN
NQGTINYLVRGGNIETLSVGNAAVMSFNNDIDSATGFYKPLIKINSAQDLIKNKEHVLLK
AKIIGYENASLGTNSISNANLIEQFNERLALYNNNNRMDTCVVRNTDDIKACGMAIGDQA
MVNNPDNYKYLIGKAWKNIGISKTANGSKISVRYLGNSTPTDNGGNTTNLPTNTTNNARF
ARYALIKNAPFAQTNATPNLVAINKHNFGTIESVFELANRSKDIDTLYAKSGAQGRDLLQ
TLLIDSHDAGYARTMIDATSANEITKQLNTATDALNNIASLEHKTNGLQTLSLSNAMILN
SRLVNLSRRHTNNIDSFAQRLQALKGQRFASLESAAEVLYQFAPKYEKPTNVWANAIGGA
SLNSGGNTSLYGTSAGVDAYLNGEVEAIVGGFGSYGYSSFNNQANSLNSGANNANFGVYS
RIFANQHEFDFEAQGAVGSDQSSLNFKSALLRDLNQSYNYLAYGASTRASYGYDFAFFRN
ALVLKPSVGVSYNHLGSTNFESNSTHKTALKNGASSQHLFNASANVEARYYYGDTSYFYM
NAGVLQEFANFGSSNAVSLNTFKVNTARNPLNTHARVMMGGELKLAKEVFLNLGFIYLHN
LISNAGYFASNLGMRYSF
NT seq 3477 nt   +upstreamnt  +downstreamnt
gtggatatgaaagatgctgtagggacttataagctttcagggctaagaaactttaccggt
ggggatttggatgtcaatatgcaaaaagccactttgcgtttgggccaattcaatggcaat
tctttcacaagctttaaggatagtgctgatcgcaccacgagagtggatttcaacgctaaa
aatatctcaattgataattttttagaaatcaataaccgcgtgggttctggagccggtagg
aaagctagctctacggttttgactttgcaagcttcagaggggatcactagcggtaaaaac
gctgaaatttctctttatgatggcgccacgcttaatttggcttcaaacagcgttaaatta
atgggtaatgtgtggatgggccgtttgcaatatgtgggagcgtatttggccccttcatac
agcacgataaacacttcaaaagtgacaggggaagtgaattttaaccatctcactgtaggt
gatagaaacgccgctcaagcaggcattatcgccagtaaaaagacttatattggcacactg
gatttgtggcaaagcgcggggttaaacattatcgcccctccagaaggtggttataaggat
aaacctaataataccaattctcaaagtggtgctaaaaacgacaaaaatgaaagcgctaaa
aacgacaaacaagatagtaacactcaggtcattaacccacccaatagcgggcaaaaaaca
gaaattcaacccacgcaagtcattgatgggccttttgctggcgccaaagacacggtggtc
aatatcagccgcatcaacactaacgctgatggcacgattaaagtgggagggtatacagct
tctcttaccaccaatgcggctaatttgaatatcggcaaaggcggtgtcaatctgtccaat
caagcgagcgggcgctctcttttagtggaaaatctaaccgggaatatcaccgttgatggg
gctttaatggtgaataatcaagtgggcggttatgctttggcaggatcaagcgcgaatttt
gagtttaaagctggtgtggataccaaaaacggcacaatcgcttttaataacaatatcagt
ctgggaagatttgtgaatttaaaagcgagcgctcatacggtcaattttaaagatattgat
actggtaatggtggtttcaacaccttagactttagtggtgttacaaacaaggtcaatatc
aacaaactcattacagcttccactaatgtggccgttaaaaacttcaacattaatgaattg
ttggttaaaaccaatgggataagtgtgggggaatacactaattttagtgaagatataggc
aaccaatcgcgcatcaacaccgtgcgtttagaaactggcactaggtcaatctattctggg
ggtgttaaatttaaaggcggtgaaaaactggttatcaatgatttttactacgccccttgg
aattattttgacgctaggaatattaaaaatgttgaaatcaccaacaaacttgcttttgga
cctcaaggaagcccttggggcacatcaaagcttatgtttaataatctaaccctaggcccc
aatgcagtcatggattatagccaattttcaaatgtaaccatatcagggaattttgtcaac
aatcaaggcactatcaattatttggttcgaggcgggaacatagaaaccttaagcgtaggc
aatgcagcagtcatgagttttaataatgatatagatagtgcgactggattttacaaaccg
cttatcaaaattaacagcgctcaagatctcattaaaaataaagaacatgtcttattgaaa
gcgaaaatcatcggttatgaaaatgcttctttaggcactaacagcattagtaatgctaat
ctaatagaacagttcaacgagcgcctagccctttataacaacaataaccgcatggatact
tgtgtggtacgaaataccgatgacattaaagcatgcgggatggctatcggcgatcaagcc
atggtgaataaccctgacaattacaagtatcttatcggtaaggcatggaaaaatataggt
atcagcaaaacggctaatggctctaaaatctctgtgcgttatttaggcaattctacgcct
actgataatggtggcaataccacaaacttacccacaaacaccactaacaacgcgcgtttc
gctcgctacgctctcataaagaacgctcctttcgctcaaactaacgccactcctaattta
gtcgctatcaataagcataactttggcaccattgaaagcgtgtttgaattagctaaccgc
tctaaagatattgacacgctttatgctaaatcaggcgcgcaaggcagggatctcttacaa
accttattgattgatagccatgatgcgggttatgccagaacaatgattgatgctacaagc
gctaatgaaatcaccaagcaattgaatacggccactgacgctttaaacaacatagccagt
ttggagcataaaacaaatggtttacaaactttgagcttgagcaatgcgatgattttaaat
tctcgtttagtcaatctctctaggaggcacaccaacaatattgactcgttcgcccaacgc
ttgcaagctttaaaaggccaaagattcgcttctttagaaagcgcggcagaagtgttgtat
caatttgcccctaaatatgaaaaacccaccaatgtttgggctaacgctattggaggagcg
agtctaaatagcggtggcaacacttcattgtatggcacaagtgcaggcgtagatgcttac
cttaatggggaagtggaagccattgtgggcggatttggaagctatggttatagctctttt
aataatcaagcgaactctcttaactctggggctaataacgctaattttggcgtgtatagc
cgtatctttgctaaccagcatgaatttgattttgaagctcaaggagctgtagggagtgat
caatcaagcttgaatttcaaaagcgctttattgcgagatttgaatcaaagctataattac
ttagcctatggcgcttcaacaagagcgagttatggttatgactttgcgttttttaggaac
gctttagtgttaaaaccaagcgttggcgtgagctataaccatttaggttcaaccaacttt
gaaagcaacagcacccataaaacggctttaaaaaatggcgcaagcagtcagcatttattc
aacgctagcgctaatgtagaagcgcgttattattatggggacacttcatacttctatatg
aatgctggagtgttacaagaatttgctaattttggttctagcaatgcggtgtctttaaac
acctttaaagtgaatactgctcgcaatcctttaaatactcatgctagagtgatgatgggt
ggggaattgaaattggctaaagaagtgtttttgaatttgggctttatttatttgcacaac
ttgatttccaatgcaggctatttcgcttccaatttaggaatgaggtatagcttctaa

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