Helicobacter pylori OK113: HPOK113_1016
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Entry
HPOK113_1016 CDS
T02510
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPOK113_1016 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hpyo03011
]
HPOK113_1016 (rpsA)
Ribosome [BR:
hpyo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HPOK113_1016 (rpsA)
Bacteria
HPOK113_1016 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
S1CSD-TOTE-1
CsrA
RuBisCo_chap_C
CBFD_NFYB_HMF
RuvA_N
Chordopox_A30L
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
BAM96924
LinkDB
All DBs
Position
1086689..1088347
Genome browser
AA seq
552 aa
AA seq
DB search
MSKIPDDQNFNDEEENFAELLKKEETLEKGTIKEGLIVSINENDGYAMVSVGGKTEGRLA
LSEITDEKGQLLYQKNDPIIVHVSEKGEHPSVSYKKVISQQKIQAKIEELGENYENAIIE
GKIVGKNKGGYIVESQGVEYFLSRSHSSLKNDANHIGKRIKACIIRVDKENHSINISRKR
FFEVNDKRQLEVSKELLEATEPVLGVVRQITPFGIFVEVKGVKGLVHYSEISHKGPVNPE
KYYKEGDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIENYGA
FVDIGNDIEGFLHVSEISWDKNVSHPSNYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNR
PFDVFESKHQVGDVLEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYKIGDV
IKVKILKINKKDKKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFINADGID
VLIKNEDLNPLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTSDD
KMTLGDILKEKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagataccagatgatcagaactttaatgacgaggaggaaaacttcgcagaactc
ttaaaaaaagaagaaaccctagaaaaaggcactatcaaagaagggctaatcgtttccatc
aatgagaatgatggttatgccatggtgagcgtgggcggtaagacagaaggtcgtttggct
ttgagcgagatcaccgatgaaaaggggcagttgctgtatcaaaaaaatgaccccattatc
gtgcatgtgtccgaaaaaggtgaacaccctagtgtttcctacaaaaaggtcatttcccaa
caaaagattcaagcgaaaattgaagaattaggcgaaaactatgaaaacgccattattgaa
ggcaagattgtaggcaagaataaagggggttatatcgtggagtctcaaggcgtggagtat
tttctctcccgctcgcactcttctttaaagaatgacgcaaaccatatcggcaaacgcatt
aaagcgtgcatcattcgtgtggataaggaaaaccattctatcaatatttctcgcaaacga
ttctttgaagtcaatgacaaacgacagcttgaagtttctaaagaattgttagaagctaca
gagcctgtgttaggggttgtgcgccaaatcaccccttttggtatttttgtagaagttaag
ggggttaagggcttagtccattattctgaaatcagccataaaggaccggtaaaccctgaa
aaatactataaagagggcgatgaagtctatgtcaaagccatcgcttatgatgaagaaaaa
agacgcctttcactctccataaaagcgaccatagaagacccatgggaagagatccaagac
aagctaaaacccggatacgccattaaggtggtggtgagcaatattgaaaattatggggcg
tttgtggatattggtaatgatattgaaggctttttgcatgtttctgaaatctcttgggat
aaaaatgtcagccaccctagcaactacttgagcgtggggcaagagattgatgtgaagatc
attgacattgatccaaaaaaccgccgcttaagggtttctttaaaacaactcactaacagg
ccttttgatgtttttgaatccaaacaccaagtgggagatgttttagaaggcaaagtggcg
actttaacggattttggggcgtttttgaatttgggtggggtggatggtttgctccacaat
cacgacgctttttgggataaagataaaaaatgcaaagaccactataaaattggcgatgtg
atcaaagtgaaaatccttaaaatcaacaaaaaagataaaaagatttctttgagtgcgaag
cacttggttacttcccctacagaagaattcgctcaaaagcataaaacagatagcgtgatt
caaggtaaagtggtgagtattaaggattttggcgttttcattaatgctgatggcattgat
gtgctgatcaaaaatgaagatttgaaccccttgaaaaaagatgaaatcaaaatagggcaa
gaaatcacatgcgtggtggttgcgattgaaaaatctaacaacaaggtgcgcgcttctgtg
cataggttagagcgcaaaaaagaaaaagaagaattgcaagcttttaacacgagcgatgat
aaaatgactttaggggatattcttaaagaaaaactctaa
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