Helicobacter pylori OK113: HPOK113_1054
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Entry
HPOK113_1054 CDS
T02510
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpyo
Helicobacter pylori OK113
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyo03016
]
HPOK113_1054 (truA)
Enzymes [BR:
hpyo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPOK113_1054 (truA)
Transfer RNA biogenesis [BR:
hpyo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOK113_1054 (truA)
Prokaryotic type
HPOK113_1054 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAM96962
LinkDB
All DBs
Position
1126022..1126750
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AA seq
242 aa
AA seq
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MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSVVIAAGRTDKGVHANNQV
LSFCTPKHWNVAKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGATTNPKRTIFNAFAYKTFIIGHEC
VVFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNTKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaacttggcgttcaagataagatagagagcgctttaaatgcgctagggatt
aaaagcgttgtgattgcggctgggcgcacggataagggcgtgcatgcgaacaatcaggtg
ctgtctttttgcactccaaaacactggaatgtcgctaaattattttattatctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactggatgcgttaaacaccgccttaaag
caattcacaggcaagcatgatttttccatgtttaaaaaagaaggcggggcgacaaccaac
cctaaacgcaccatttttaacgcttttgcttataaaacctttatcatagggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttgcgctctagcgtgcgtttgatcattcaa
gcgtgcgtccaatactccttagaaaaaatcacgctcgctgaaattcaagcgcaaatccac
aacaccaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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