Helicobacter pylori OK113: HPOK113_1112
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Entry
HPOK113_1112 CDS
T02510
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo02024
Quorum sensing
hpyo03060
Protein export
hpyo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HPOK113_1112 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPOK113_1112 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPOK113_1112 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hpyo02044
]
HPOK113_1112 (ffh)
Enzymes [BR:
hpyo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HPOK113_1112 (ffh)
Secretion system [BR:
hpyo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HPOK113_1112 (ffh)
Eukaryotic Sec-SRP protein
HPOK113_1112 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
CbiA
SRP54_N
AAA_31
Zeta_toxin
AAA_22
AAA_30
nSTAND3
AAA_24
cobW
NPHP3_N
AAA_17
SLFN-g3_helicase
6PF2K
AAA_19
APS_kinase
ArsA_ATPase
AAA_14
AAA_16
Fer4_NifH
AAA
T2SSE
AAA_11
NTPase_1
AAA_33
ABC_tran
Thymidylate_kin
ParA
NACHT
KTI12
ResIII
AAA_5
TsaE
AAA_18
MraZ
PhageMin_Tail
ParBc
ATP_bind_1
YqeC
Motif
Other DBs
NCBI-ProteinID:
BAM97020
LinkDB
All DBs
Position
complement(1182295..1183641)
Genome browser
AA seq
448 aa
AA seq
DB search
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIVSLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMANALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcattaagcgatgggtttaaaaacgcactcaataaaatccgctttcaagat
gatgaaaaagcgctagatcgggcattagatgaattgaaaaaaacgcttttaaaaaatgat
gtgcatcataaagtggctagagaattgctcaaaaaagtggaaagtcaaaccaaacttaat
ggcattggcaagcagcaatttttagacgctttagaaaagagtttattagaaattttaagt
gctaaagggagtagcggttttactttcgctcaaacgccccccaccgtggttttaatggca
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcctagcggcagtggagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagttttttatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcacaatttgatgttttgctc
gtggatagcgcggggcgtttagctattgataaagagcttatgcaagaattaaaagaagtt
aaagaagtcttaaacccccatgaagtgctgtatgttgcagacgccttgagcgggcaagat
ggggtcaaaagcgcgaacacctttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgatagcgattctaaagggggtatcgccttaggcatcacttaccagttaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatttagatgtgtttgtgcctgaa
agaatcgtggggcgtttgatgggggctggagatattgtctcgctcgctgaaaaaaccgcc
agcgttttaaaccctaatgaagccaaagatttaagcaaaaagctcaaaaaagggcaattc
actttcaacgattttttaaaccaaattgaaaaggtaaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaaacgcactgaaagacacagattta
gaaagctctttagaggtgaaaaaaatcaaggctatggtcaattccatgaccaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagtggc
ttagaagtgtctgaaatcaaccgcatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaacgaataaaaagggcattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacaccccctaaaatgcgctga
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