Helicobacter pylori OK113: HPOK113_1196
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Entry
HPOK113_1196 CDS
T02510
Symbol
alaS
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPOK113_1196 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpyo01007
]
HPOK113_1196 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyo03016
]
HPOK113_1196 (alaS)
Enzymes [BR:
hpyo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HPOK113_1196 (alaS)
Amino acid related enzymes [BR:
hpyo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HPOK113_1196 (alaS)
Transfer RNA biogenesis [BR:
hpyo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPOK113_1196 (alaS)
Prokaryotic type
HPOK113_1196 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAM97104
LinkDB
All DBs
Position
complement(1281570..1284113)
Genome browser
AA seq
847 aa
AA seq
DB search
MDIRNEFLQFFHNKGHVIYPSMPLVPNDATLLFTNAGMVQFKDIFTGIVPRPSIPRATSS
QLCMRAGGKHNDLENVGYTARHHTLFEMLGNFSFGDYFKEEAILFAWEFVTKNLGFKPKD
LYISVHEKDDEAVKLWEKFVPFDRIKKMGDKDNFWQMGDSGPCGPCSEIYIDQGEKHFKG
SEDYFGGEGDRFLEIWNLVFMQYERSNDGVLSPLPKPSIDTGMGLERVQALLEHKLNNFD
SSLFAPLMEEISELTSLDYVSEFQPSFRVVADHARAVAFLLAQGVHFNKEGRGYVLRRIL
RRALRHGYLMGLKEAFLYKVVGVVCEQFSNTHAYLKESKEMVLKECFEEEERFLETLESG
MELFNLSLKHLNENKIFDGKIAFKLYDTFGFPLDLTNDMLRSHGARVDMQGFESCMQEQV
KRSKASWKGKQNNADFSTILNAYAPNEFAGYETTECLAKALGFFDSDFKEITDANPNQEV
WVLLEKTPFYAEGGGAIGDRGTLLKDNEEAAIVLDTKNFFGLNFSLLEIKKALKKGDQVI
AQVSDERLEIAKHHSATHLLQSALREVLGSHVSQAGSLVESKRLRFDFSHPKALNDEELE
KVEDSVNAQIFKHLTSQVEHMPLNQAKDKGALALFSEKYAENVRVVSFKEASIELCGGIH
VENTGLIGGFRIVKESGVSSGVRRIEAVCGKAFYQLAKEENKELKNAKIALKNNDVIAGI
NKLKESVKNSQKAPVSVDLPVEKIHDINLVVGVVEQGDIKEMIDRLKSKHERLLAMVFKK
ENERITLACGVKNAPIKANAWANEVAQILGGKGGGRGDFASAGGKDIEKLQAAINLAKNT
ALKALEG
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgcaacgaatttttacaattttttcacaataaggggcatgttatttatcct
agcatgcctttagtgcctaatgacgctaccttgctttttaccaatgctggcatggtgcaa
tttaaagatatttttaccgggattgtgccacgccctagcattcctagagcgacaagttcg
caattgtgcatgcgagcgggtggcaagcataacgatttagaaaatgtcggttacaccgca
agacaccacacgctttttgaaatgttagggaatttctcttttggggattatttcaaagaa
gaagcgattttgtttgcgtgggaatttgtaaccaaaaatttagggtttaagcctaaagat
ttatatatcagcgtgcatgaaaaagacgatgaggccgttaagctatgggaaaagtttgtg
ccttttgacaggattaaaaaaatgggcgataaagataatttctggcaaatgggcgatagt
gggccttgcgggccttgcagtgaaatctacattgatcaaggcgaaaaacactttaagggg
agcgaggattattttgggggcgagggcgataggtttttagaaatttggaatttggtgttc
atgcaatacgaacgctctaatgatggcgttttgtcccccttgccaaagcctagcattgat
acaggcatggggttagaaagggtgcaagcgctattagaacataagctcaataattttgat
tcttcattatttgcgcccttaatggaagaaatcagcgagcttacaagcttggattatgtg
agcgaattccaaccaagctttagggtggtggccgatcacgcaagggcggtagcgtttttg
ctcgctcaaggggtgcatttcaataaggaaggccgtggctatgttttaaggcgcatttta
aggcgagccttaaggcatgggtatttaatgggcttgaaagaagcgtttttatacaaagtc
gtgggcgtggtgtgcgagcaattttccaacacgcatgcgtatttgaaagaatctaaagaa
atggtgctgaaagaatgctttgaagaagaagagcgctttttagagactttggaatcgggc
atggaattgtttaacttgtctttaaagcatttgaatgaaaataaaatttttgatggcaag
atcgctttcaagctttatgacacttttggttttcctttggatttaaccaacgacatgtta
agaagtcatggggcgcgcgtggatatgcaaggctttgaatcttgcatgcaagagcaagtg
aaacgctctaaagcttcatggaaaggcaaacaaaacaacgctgattttagcactatttta
aacgcttatgcgcccaacgaatttgcggggtatgaaacgacagaatgtttggctaaagcc
ttagggttttttgatagcgattttaaagaaataacagatgcaaatcctaaccaagaagtt
tgggtcttgctagaaaaaaccccattttatgctgagggtgggggggctataggcgatagg
ggcacgcttttaaaggacaatgaagaagcggctatagtgttggacacaaaaaactttttt
gggcttaatttttcgctccttgaaatcaaaaaagcgctaaaaaaaggcgatcaagtgatc
gcacaagtgagcgatgagcgcttagaaatcgccaaacaccatagcgcgacgcatttgttg
cagagcgctttaagagaagttttaggctcgcatgtgagtcaggcagggagtttagtggaa
tccaaacgattgcgttttgatttctcgcaccctaaagcgctcaatgatgaagagttagaa
aaagtagaagattcagtcaacgctcaaattttcaagcacctaactagccaggtggagcat
atgcccttaaatcaggctaaagataagggagcgttagcgttatttagcgagaaatacgct
gaaaatgtgcgggtggtgagctttaaagaagcgtccattgaattgtgtgggggcattcat
gtggaaaataccgggctgattggggggtttaggattgtaaaagagagcggggtgagtagc
ggggtcagacgcattgaggcggtgtgcgggaaagccttttaccaactggctaaagaagaa
aataaagagcttaaaaacgctaagattgcattaaaaaataacgatgtgatagccggcatt
aacaagcttaaagagagcgtgaaaaacagccaaaaagcccccgtttctgtggatttaccg
gttgaaaaaatccatgacataaatttagtggtgggcgtagtggaacaaggcgacattaaa
gaaatgattgaccgattgaaaagtaagcatgaaagattgctcgctatggtgtttaaaaaa
gaaaatgagcgaataactctcgcatgcggggtgaaaaacgcgcccataaaagcgaatgcg
tgggctaatgaagtggcgcaaattttagggggcaaagggggcggaagaggcgattttgcg
agcgctggaggcaaggatattgaaaaattgcaagccgcgatcaatttagcgaaaaatacc
gctcttaaagctttagagggatag
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