Helicobacter pylori OK113: HPOK113_1500
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Entry
HPOK113_1500 CDS
T02510
Symbol
pbp2
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo00550
Peptidoglycan biosynthesis
hpyo01100
Metabolic pathways
hpyo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPOK113_1500 (pbp2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPOK113_1500 (pbp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpyo01011
]
HPOK113_1500 (pbp2)
Enzymes [BR:
hpyo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPOK113_1500 (pbp2)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpyo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPOK113_1500 (pbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BAM97408
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Position
complement(1598097..1599872)
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AA seq
591 aa
AA seq
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MKNLRYKLLLFVFIGFWGLLVLNLFILSVKNQKYYEKLAERNMTKKEFLVPTRGNITDRN
HEFLATNELVFSVFLPSGLKQKELLEKIGIIQTFFPNFSKETLLNNYQKENSLYNHNLIK
VVGFIPYIAMQPLYTKLIQTQGIFVHPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGIEKEYNKLLQGKVGYKIMRVNALNQELATLEVVPPSTNNHLQLSLDKRLQ
KEADKLFENKRGAILVMDAENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLNITENTTIPTPPFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLKISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAINNKQPLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIINRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVKMSNKLYELGYLNPL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttcgctataagcttttgctctttgtttttatagggttttgggggttattg
gttttaaatttatttattttaagcgttaaaaatcaaaaatactatgaaaaactggctgaa
cgaaacatgactaaaaaggaatttctagtccctacaaggggcaatattacagacagaaac
catgagtttttagccactaatgaattggtgtttagcgtgtttttgcccagcggattgaag
caaaaagaacttttagaaaaaattggaatcatccaaacatttttccctaacttttccaaa
gaaacgcttttaaacaattaccaaaaagaaaattcgctttacaaccataacctcattaaa
gtggtgggattcattccttatatcgccatgcaacctctttataccaaactcatccaaact
caaggcatttttgtgcaccctttagacaagcgctactatcctaataacgctttagcttcg
catgttttaggctatgtgggggtggcaagcttgcaagatctaaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcattgaaaaagaatacaacaagcttttacaa
ggcaaggtgggctataaaatcatgcgcgtcaatgcactcaatcaagaattagccacctta
gaagtagtaccaccaagcaccaacaaccacttgcaattgagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaggggggcgattttagtgatggatgcagaa
aatggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtaggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccctactaaac
cgcttcgctaacgccttgtatccgccgggatctgtggttaaaatgggcgtgggcttgagc
tttttagaaaaccttaacatcacagaaaacaccaccatacccacccctccttttattgaa
gtgggtaagcgcaaattcagagattggaaaaaaacagggcatggcaattctaatttgtat
aaagccattagggagtccgtggatgtgtacttttataagtttgggcttaaaatctctata
gaaaaactctctaaaaccttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaaactcaaacgcttcaatcaa
gattggcgcgttggggacacgctcattaccgctattgggcaaggctcttttttggccacg
cccttgcaggttctcgcctacacgggactcattgctacgggcaaactggcaacgcctcat
ttcgctatcaacaacaaacaaccgctcaaagatcccctaaatagctttcaaaaaaagaag
ctccaagccttgagagtgggcatgtatgaagtgtgcaaccataaagatggcaccgcttat
cattccacaaggggttctaaggttactttagcgtgtaaaaccggcaccgcgcaagtcgtg
gaaatcgctcaaaacattatcaatcgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattaccgcattcttgccttatgaaaaacccaaatacgctatcactatt
ttagtagaacatggggaagggggttcaaaactggggggcttgttagtgaaaatgagcaac
aaactctatgaacttggctatcttaacccattgtaa
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