Helicobacter pylori OK113: HPOK113_1507
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Entry
HPOK113_1507 CDS
T02510
Symbol
dniR
Name
(GenBank) regulatory protein DniR
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpyo
Helicobacter pylori OK113
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpyo01011
]
HPOK113_1507 (dniR)
Enzymes [BR:
hpyo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPOK113_1507 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpyo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPOK113_1507 (dniR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_Mga
SLT_2
DUF928
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
BAM97415
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All DBs
Position
complement(1603495..1604619)
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AA seq
374 aa
AA seq
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MPKRMKCFNQKWLVFFVTHWLLLASLGHAKMAFESNIDTKALEAFGVNAGFLSQMPNALK
KMNKEEEWKKLVKRFDVNYQFIPIIKNMLIEASVPQEFLFLAMAESKFSSRAYSRKKAVG
IWQFMPSTAKELGLKVNHYIDERRDPIKSTQAAITYLKRLYKQTGEWYLVAMAYNYGLRK
VQNAIKAAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGAR
VSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYERLALFK
QRQLKQNKNIQASPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRL
IIPTNKKLLATREF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaatgaagtgttttaatcaaaaatggttggttttttttgttacccattgg
cttttgttggcttctttaggccatgcgaaaatggcttttgaatccaatattgacaccaaa
gcgttagaggcttttggggttaatgcgggctttttatcccaaatgccaaacgctttaaaa
aaaatgaataaagaagaagagtggaaaaagttagtcaaaagatttgatgtgaattaccag
ttcatccccatcattaaaaacatgctaatagaagcgagcgtgccgcaagaatttttattt
ttagccatggcagagtctaaattttcatcaagggcttatagcaggaaaaaagcggtaggg
atttggcaattcatgccaagcacggctaaagaattagggcttaaggtcaatcattacatt
gatgaaagaagagatcccattaaaagcactcaagcggcgatcacttacttgaaacggctc
tacaagcaaaccggggagtggtatttggtcgctatggcgtataattacggcttgcgcaag
gttcaaaacgccattaaagccgccggcacttcggacattaagattttgttagatgaagat
aaaaaataccttcccaaagaaacacgagagtatatccgctccattctaagcctagcgttg
aaattcaacagcctagacaacctcaaagataaagaatatctgctcaatcgtggggcgagg
gtgagtttagtgggcgtcccgtttaaaaggcacacttctttagtccaagtggctaaaaat
ttaaacttgagtttagaaaccttaaaatcttacaaccaccaattccgttataacattctg
ccttctaaagaccccacctacaccatttatatcccttatgaaagactcgctcttttcaaa
caacgccagctcaaacaaaataaaaacattcaagccagtccaaaaagcccttttatcacc
catgtggtcttgcctaaagaaaccttatcttctatcgctaaacgctatcaagtcagcatt
tctagtatccaattagccaataacctcaaggattctaatatttttatccaccagcgctta
atcatccccaccaacaaaaaattactcgctacaagggaattttaa
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