Helicobacter pylori UM032: K747_12915
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Entry
K747_12915 CDS
T02658
Name
(GenBank) DEAD/DEAH box helicase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpyr
Helicobacter pylori UM032
Pathway
hpyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K747_12915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyr03400
]
K747_12915
Enzymes [BR:
hpyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K747_12915
DNA repair and recombination proteins [BR:
hpyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K747_12915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_22
ADDB_N
AAA_19
nSTAND3
PhoH
AAA_7
AAA_30
CobU
Motif
Other DBs
NCBI-ProteinID:
AIN76148
LinkDB
All DBs
Position
1092508..1094367
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AA seq
619 aa
AA seq
DB search
MFYHLIVPLKNKTPPLTYFSKERHQKGALVNIHLRNKTLLGVVLEEVSKPSFECLELEKT
PCFLLPFQIDLALFIAQYYSANLSSVLSLFTPFKECDLVGLEKIEPVLNALSQTQTNALK
ELQKHSASLLFGDTGSGKTEIYMHSIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKEN
LGLWHSKLSQAQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEALKQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICNACQGEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSSFKAPIEKIASSYRYLILLRSKNPLNLIKSVHAF
LKTARNIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttaatcgttcctttaaaaaataaaaccccccctttaacttacttttct
aaggagcggcaccaaaaaggagcgttagttaatatccatttaaggaataaaacgcttttg
ggagtcgttcttgaagaagtttcaaaaccctcttttgaatgcctagaactagaaaaaacc
ccttgttttttactcccctttcaaatagatctcgctctatttatcgctcaatactactcg
gctaatctttcttcagtcttaagcctttttaccccttttaaagaatgcgatttggtgggg
ttagaaaaaattgagcctgttcttaatgcgttaagccaaacgcaaacaaacgctttaaaa
gaattgcaaaaacattcagcaagcttgctctttggcgatacgggtagcgggaaaaccgag
atttatatgcattcaatcgctcaaactttagagcaaaaaaaaagcgctttattgttagtg
ccagaaatcgccctcacccctcaaatgcaacaacgccttaaaagggtctttaaagaaaat
ttaggcttgtggcatagcaaactctctcaagcccaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattggtggtaggcacacgaagcgcgttgtttttaccccttaag
gagttgggtttaatcattgtagatgaagagcatgacttttcttataagtctcatcaaagc
cctatgtataacgctagggatttatgcttgtatttatcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaagataaggcttta
gtgcgcttaaaggggcgctacacgcctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctggaagcactaaaacaagttatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgtcaaaattgctac
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcaacgcgtgtcaa
ggcgaagttttagtgggtaaaaggataggcaccatgcaagtgttgaacgagttggaaggc
cttttgaaaggcgctaaaatagccattttagataaagatcataccagcacgccaaaaaaa
ctccacaatattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatccaatagttatagggctttagaagaaggcgtgtcgttactttatcaa
atcgctgggaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacg
gatctattagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttagagtttaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctagctttaaagcccccattgaaaaaatcgcttcttcttatcgc
taccttattttattgcgttccaaaaaccctttaaacctaatcaaaagtgtgcatgcgttt
ttaaaaaccgcccggaatatcccttgcagcgtgaatatggatcctgtggatattttttaa
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