Helicobacter pylori SouthAfrica20: HPSA20_0003
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Entry
HPSA20_0003 CDS
T02807
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00541
Biosynthesis of various nucleotide sugars
hpys01100
Metabolic pathways
hpys01250
Biosynthesis of nucleotide sugars
Module
hpys_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPSA20_0003 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
HPSA20_0003 (kdsA)
Enzymes [BR:
hpys01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HPSA20_0003 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
Lipid A
HPSA20_0003 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF3657
Motif
Other DBs
NCBI-ProteinID:
AGT73253
UniProt:
T1U9Y9
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Position
complement(909..1739)
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AA seq
276 aa
AA seq
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MNTSNTKTPKSVLIAGPCVIESLENLRSIATKLQPLANNERLDFYFKASFDKANRTSLES
YRGPGLEKGLEMLQIIKEEFGYKILTDVHESYQASVAAKVADILQIPAFLCRQTDLIVAV
SQTDAIVNIKKGQFMNPKDMQYSVLKALKTRDSSIQSPTYETALKNGVWLCERGSSFGYG
NLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFAPILARAAAAVGIDGLFA
ETHIDPKNALSDGANMLKPDELEYLVTDMLKIQNLF
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaacacttctaacacaaaaacccccaaatccgttttaatcgctgggccatgcgtcatt
gagagtttagaaaatctaagaagcatcgctactaaattacaacccctagccaataacgag
cggttggatttttattttaaagcgagttttgataaggctaaccgcacgagtttagagagt
tacagagggcctggtttagaaaaaggcctagaaatgttacaaattatcaaagaggaattt
ggctataaaattttaaccgatgtgcatgagagctatcaagcaagcgtggcagccaaagta
gcggatattttacagatcccggcgtttttgtgccgccaaacggatctgattgtagcagtg
agccagactgacgctattgtcaatatcaaaaaagggcaattcatgaacccaaaagacatg
caatattctgtcttaaaagcccttaaaacaagagatagtagcattcaaagccccacttat
gaaacggcgttgaaaaatggcgtgtggctgtgtgaaagggggagcagctttgggtatggg
aatttagtggtggatatgcgctctttaaaaatcatgcgagaatttgcccctgtgattttt
gacgctacccatagcgtgcaaatgccagggggagcgaacgggaaaagttcaggagacagc
tcttttgcccctattttagccagagcggcggctgcggtggggattgatgggttgttcgct
gaaacgcacattgatcctaaaaacgccctaagcgatggagcgaacatgctaaaacctgat
gagttagaatatttagtaaccgacatgttaaaaatccaaaacttattttaa
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