Helicobacter pylori SouthAfrica20: HPSA20_0015
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Entry
HPSA20_0015 CDS
T02807
Name
(GenBank) outer membrane family protein
KO
K15845
outer membrane protein HopZ
Organism
hpys
Helicobacter pylori SouthAfrica20
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
Rogdi_lz
DUF6734
Motif
Other DBs
NCBI-ProteinID:
AGT73260
UniProt:
T1U7C8
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Position
complement(5054..7051)
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AA seq
665 aa
AA seq
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MVKNTGELKKLSDTYENLSNLLNNFNNLNRAVTNASSPSEINAAIDNLKANTQGLTGEKD
NSPAYQAVSLALNAAVGLWNVIGYAIMCGNGDGTGGGPGSVVFNNQPGSYSTSITCNRYE
ATGPGKSMSIQEFEKLNKAYQAIQQALKNDKGFPVLDGKGTKVTVSYTYECKQTDTINGG
VNQFCNKNGSNNGVTSTGSNNKETQQTFKFTNTAQNLLEQASTIMNVLNTQCPLVRSTHN
VDAPGNGSPWGIDKGGNACQIFSAEFSAVTSMIKNAQEIVAQAQSLNTNQQGNQNAPQDF
NPYTSSDRAFAQNMLNHAQAQAKMLELADQIKTNLSAIPTKFTTDYLAACRNGNGTTPNE
GVTNNTWGAGCAYVEETITALNNSLVHFGTRAEQIKQSELLARTILDFRGSLSTLNNTYN
SITTTASNTPNSPFLKNLISQSTNPNNPGGLQAVYQVNQSAYSQLLSATQELGHNPFRRF
GLISSQTNNGAMNGIGVQVGYKQFFGEKRRWGLRYYGFFDYNHAYIKSSFFNSASDVFTY
GVGTDVLYNFINDKTTKNSKISFGVFGGIAIAGTSWLNSQYVNLATFNNFYSAKMNVANF
QFLFNLGLRMNLAKNKKKASDHVAQHGVELGVKIPTINTNYYSLLGTQLQYRRLYSVYLN
YVFAY
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaacaccggcgaattgaaaaagctctcagacacttatgagaatttgagcaac
cttttaaacaatttcaacaacctcaatcgcgcggtaacgaatgcgagcagcccttcagaa
atcaatgctgcgatcgataatttaaaagcaaacacgcaagggttgaccggcgaaaaagac
aattccccagcctatcaagccgtctctttagcgctcaatgcggcggtgggcttgtggaac
gtgataggctatgcgataatgtgcgggaatggggatggcacagggggtgggcctggcagc
gttgttttcaataaccaaccaggatcttactcaacgagcatcacttgcaaccggtatgaa
gcgactggtcctggtaaatccatgtctatccaagaatttgaaaaactcaataaggcctat
caggctatccaacaggctttaaaaaacgacaaggggtttcctgtcttagacgggaaaggc
acaaaagtgaccgtaagctacacctacgaatgcaagcaaactgatactattaatggcggt
gtgaatcagttctgtaacaaaaatggtagcaacaatggggttactagcactggtagcaac
aacaaagaaacgcagcaaacattcaaatttaccaataccgctcaaaaccttttggagcaa
gccagcacgatcatgaatgtccttaacactcaatgccccttggtgcgatctacgcataat
gtagacgctccgggtaatggtagcccatggggtatcgataaaggtgggaatgcatgccaa
atctttagcgctgagtttagcgctgttactagcatgatcaaaaatgcccaagaaatcgtc
gcgcaagctcaaagccttaatactaaccagcaaggcaatcaaaacgcgccgcaagatttc
aacccttacacctcttctgatagggctttcgctcaaaacatgctcaatcacgcgcaagcg
caagccaagatgcttgaactagccgatcaaatcaaaaccaatcttagcgctatccctaca
aaattcaccacagactacctagcagcttgcagaaatgggaatggcacaacacctaatgaa
ggggttactaacaacacttggggggccggttgcgcgtatgtggaagagacgataacggct
ttaaacaacagccttgtgcattttggcactcgagccgagcaaatcaagcaatctgagttg
ttggcgcgcacgatacttgattttagaggcagccttagcactttaaacaacacttataac
agcatcaccacgaccgcttcaaacacgcccaattccccattccttaaaaatttgataagc
caatccactaaccccaataaccccgggggcttacaggccgtttatcaagtcaaccaaagc
gcttattcgcaattattaagcgccacgcaagaattagggcataaccctttcagacgcttt
ggattgatcagctctcaaaccaacaacggcgcgatgaacgggatcggcgtgcaagtgggc
tataagcaattctttggtgaaaaaagaagatggggattaaggtattacggcttttttgac
tataaccatgcttatatcaaatccagctttttcaactccgcctccgatgtgttcacttat
ggggtagggacagatgtcctttataactttatcaacgataaaaccaccaaaaacagcaag
atttcttttggggtgtttggggggattgcaatagctggcacttcgtggcttaattctcaa
tacgtgaatttagcgacattcaataatttctatagcgctaaaatgaatgtggcgaatttc
caattcttattcaatttaggcttgagaatgaatctggctaaaaacaaaaagaaagcaagc
gatcatgtagctcagcatggcgtggaattaggcgtgaagatccccacgatcaacacgaat
tactattctttgctaggcactcaactccaataccgcaggctttatagcgtgtatttgaat
tatgtgtttgcttactaa
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