Helicobacter pylori SouthAfrica20: HPSA20_0017
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Entry
HPSA20_0017 CDS
T02807
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPSA20_0017 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpys03019
]
HPSA20_0017 (groL)
03110 Chaperones and folding catalysts [BR:
hpys03110
]
HPSA20_0017 (groL)
03029 Mitochondrial biogenesis [BR:
hpys03029
]
HPSA20_0017 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpys04147
]
HPSA20_0017 (groL)
Enzymes [BR:
hpys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HPSA20_0017 (groL)
Messenger RNA biogenesis [BR:
hpys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HPSA20_0017 (groL)
Chaperones and folding catalysts [BR:
hpys03110
]
Heat shock proteins
HSP60 / Chaperonin
HPSA20_0017 (groL)
Mitochondrial biogenesis [BR:
hpys03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HPSA20_0017 (groL)
Exosome [BR:
hpys04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPSA20_0017 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HPSA20_0017 (groL)
Exosomal proteins of breast cancer cells
HPSA20_0017 (groL)
Exosomal proteins of colorectal cancer cells
HPSA20_0017 (groL)
Exosomal proteins of bladder cancer cells
HPSA20_0017 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGT73262
UniProt:
T1U8L3
LinkDB
All DBs
Position
complement(7477..9117)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIIGELKKSSKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAILTGGQVI
SEELGLSLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSDDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVRLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVEKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaattttcagatagcgcgagaaaccttttatttgaaggcgtgaga
caactccatgacgctgtcaaagtaaccatgggaccaagaggtaggaacgtgttgatccaa
aaaagctatggcgctccaagcatcactaaagatggcgtgagcgtggctaaagagattgaa
ttaagttgcccggtcgctaacatgggcgctcaattagtcaaagaagtggcgagcaaaacc
gctgatgctgccggtgatggcacgactacagcgaccgtgctggcttatagcatttttaaa
gaaggtttgaggaatatcaccgctggggctaaccctattgaagtgaaaagaggcatggac
aaagccgctgaagcgatcattggtgagcttaaaaagtctagcaaaaaagtgggcggtaaa
gaagaaatcactcaagtagcgaccatttctgcaaactccgatcacaatatcgggaagctc
atcgctgacgctatggaaaaagtgggcaaagacggcgtgatcaccgttgaagaggctaag
gggattgaagacgaactagatgtcgtagaaggcatgcaatttgatagaggctacctctcc
ccttattttgtaacgaacgctgagaaaatgaccgctcaattggataacgcttacatcctt
ttgacggataaaaaaatctctagcatgaaagacattctccccctattagaaaaaaccatg
aaagagggcaaaccgcttttaatcatcgctgaagacattgagggcgaagctttaacgact
ctagtggtgaataaattaagaggcgtgttgaatatcgcagcggttaaagctccaggcttt
ggggacaggagaaaagaaatgctaaaagacatcgctattttaaccggcggtcaagtcatt
agcgaagaattgggcttgagtctagaaaacgctgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggccatagcgatgac
gttaaagatagagtcgcacaaatcaaaacccaaattgcaagcacgacaagcgattacgac
aaagaaaaattgcaagaaagattggctaaactctctggcggtgtggctgtgattaaagtg
ggcgctgcgagtgaagtggaaatgaaagagaaaaaagaccgggttgatgatgcattgagc
gcgactaaagcggctgttgaagaaggcattgtgattggtggcggcgcggccctcattcgc
gcggctcaaaaagtgcgtttgaatttgcacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattagctcaaatcgctattaacgctggttatgatggcggt
gtggtcgtgaatgaagtggaaaaacacgaagggcattttggctttaacgctagcaatggc
aagtatgtggacatgtttaaagagggcattattgaccccttgaaagtagaaaggatcgct
ttacaaaatgcggtttcggtttcaagcttgcttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcaaccccagcaatgcctgatatgggtggcatgggcggtatgggt
ggcatgggcggcatgatgtaa
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