KEGG   Helicobacter pylori SouthAfrica20: HPSA20_0025
Entry
HPSA20_0025       CDS       T02807                                 
Name
(GenBank) type IV secretion/conjugal transfer ATPase, VirB4 family protein
  KO
K12053  ComB4 competence protein
Organism
hpys  Helicobacter pylori SouthAfrica20
Brite
KEGG Orthology (KO) [BR:hpys00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpys02044]
    HPSA20_0025
Secretion system [BR:hpys02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPSA20_0025
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 AAA_29 nSTAND3 P-loop_TraG AAA_10 RsgA_GTPase TraG-D_C AAA_22 AAA_23 AAA_16 DUF5398 T2SSE PduV-EutP SMC_N ResIII ABC_tran DUF5727 AAA_7 CbiA
Other DBs
NCBI-ProteinID: AGT73270
UniProt: T1U7D7
LinkDB
Position
14113..16476
AA seq 787 aa
MLEKLVSAVKQKISNYFLGVLPKSYSMSEENNILGLYDEHFLLTKNENLVGILRLEGVSY
THLSTEQLQDLFTERQMALDSLEKVVARIVVKRRKIDCKQNIQANSQHLQAILNQFENKE
VYENQYFLVLESTHSLQGVLEHKKKSLMHANRENFKDILSYKAHFLQETLRSLEIQLKNY
APKLLNSKEVLNFYAEYINGFELPLKPLVGGYLSDSYIASSVTFEKDYFIQESFNQKTYN
RLIGIKAYESERITSIAIGALLYQEMPLDIIFSIEPMSAHKTLSFLKERAKFSMSNLVKN
ELLEYQELVKTKRLSMQKFALNILIKAPSLESLDTQTSLILGLLFKENLVGVIETFGLKG
GYFSFFPERIHLNHRLRFLTSKALACLMVFEKQNLGFKANSWGDSPLSVFKNLDYSPFLF
NFHNQEVSHKNAKEIPRVNGHTLIIGATGSGKSTLMSFLMMSALKYQNMRLLAFDRMQGL
YSFTEFFKGHYHDGKSFSINPFCLEPNLQNLEFLQSFFLSMFDLAPSRNKEALEDMNAIS
SAIKSLYETLYPKAFSLLDFKETLKRTSSNQLGLSLEPYLHNPLFNALNDAFNSNAFLNV
INLDTITQNPKDLGLLAYYLFYKILEESRKNDSGFLVFLDEFKSYVENDLLNTKINALIT
QARKANGVVVLALQDIYQLSGVKNAHSFLSNMGTLILYPQKNARELKNHFNVPLSETEIS
FLENTPLYARQVLVKNLGNGSSNMIDVSLEGLGRYLKIFNSDSSHVNKLKALQKDYPKEW
REKLLKS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgctagaaaagcttgtaagcgctgtcaaacaaaaaatttcaaactattttttaggggtt
ttgcctaaaagctattctatgagcgaagaaaataatattttaggcttgtatgatgagcat
tttttactcactaaaaatgaaaaccttgttggcattctccggttagaaggggtgagttac
acccatttaagcacagagcaattgcaagatcttttcaccgagcgccaaatggcgttggat
tctttagaaaaagtcgtggcgcgcatcgtggttaaaaggcgtaaaattgattgcaagcaa
aacattcaagccaattcccaacacttgcaagcgattttaaaccagtttgaaaataaagaa
gtgtatgagaatcagtattttttagttttagaaagcactcattccttgcaaggcgtttta
gagcataagaaaaaatccttaatgcatgctaatagggaaaattttaaggatattctctct
tataaagcgcattttttgcaagaaactttaagaagtttagaaatccaactcaaaaattat
gcccccaaacttttaaactctaaagaggtgttgaatttttacgcagaatacatcaacggg
tttgagctgcctttaaagcctttagtgggagggtatttgagtgatagctatatcgctagt
tctgttacttttgaaaaagattatttcattcaagaaagtttcaatcaaaaaacctacaac
cgcttgatcggcattaaagcttatgagagcgaacgcatcacctccatagcgatcggagcg
cttttataccaagagatgccactagatattatcttttccatagagccaatgagcgcgcat
aaaacgctgagttttttaaaagaaagggctaagtttagcatgtctaatctcgttaaaaac
gagctgttagaataccaagaattagtcaaaaccaaacgcttatccatgcaaaaattcgcc
ctaaacattcttattaaagcccctagtttagaaagtttagacacccaaacgagcttgatt
ttagggcttttgtttaaagaaaatttagtgggcgttatagaaacttttggcttgaaagga
gggtatttttcctttttccctgaacgcatccatttaaaccaccgcttgcggtttttaacc
tctaaagctttagcgtgtttaatggtctttgaaaagcaaaatttaggttttaaggccaat
tcatggggggatagccctttgagcgtgtttaaaaatttggattattccccttttttattc
aatttccacaaccaagaagtgagtcacaaaaacgctaaagaaatccctagagtgaacggg
catacgctaatcataggggctactgggagcggtaaaagcacgctgatgagctttttaatg
atgagcgctttaaaataccaaaacatgcgccttttggcctttgacaggatgcaagggttg
tattctttcacagagttttttaaagggcattaccatgacggcaaatcttttagcatcaac
cccttttgtttagagcccaatttgcagaatttagagtttttgcaatccttctttttgagc
atgtttgatcttgccccttcaaggaataaagaagccctagaagacatgaatgcgatttct
agtgcgattaaaagcctttatgagactttatacccaaaagcttttagtttgctagatttt
aaagaaacgcttaaaagaacctcatctaaccaattgggtttaagcttagagccgtatttg
cataaccccctttttaacgccttaaatgatgcattcaattctaacgcttttttaaatgta
atcaacctagacaccatcactcaaaaccctaaagatttagggcttttagcctattatttg
ttttataaaatcttagaagaatccagaaaaaacgacagcggatttttggtttttttagac
gagtttaaatcctatgtggaaaacgatttactgaacactaaaatcaacgctttaatcacg
caagccagaaaagctaatggcgtggtggtgttagccttgcaagatatttaccagctcagt
ggggtcaaaaacgcccatagttttttaagcaacatggggactcttattttgtatccgcaa
aaaaacgccagagaattgaaaaatcatttcaatgtgcctttgagcgagactgaaatttct
tttttagaaaacacccccttgtatgcgaggcaggttttagtcaaaaatttaggcaacggg
agttctaacatgattgatgtgagcttggagggcttggggcgttatttgaaaatctttaat
tcggattctagtcatgtcaataagctgaaagcgttgcaaaaagactacccgaaagaatgg
cgtgaaaaacttttgaagagttag

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