Helicobacter pylori SouthAfrica20: HPSA20_0162
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Entry
HPSA20_0162 CDS
T02807
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPSA20_0162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpys03400
]
HPSA20_0162
Enzymes [BR:
hpys01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
HPSA20_0162
DNA repair and recombination proteins [BR:
hpys03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPSA20_0162
Prokaryotic type
HPSA20_0162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
NUDIX_4
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AGT73405
UniProt:
T1U7S7
LinkDB
All DBs
Position
complement(150591..151460)
Genome browser
AA seq
289 aa
AA seq
DB search
MSQQTQINTVVERFYSPFLKAFPTLQDLASAPLEEVLLLWRGLGYYSRAKNLKKSAEICV
KEHDSQLPNDYQSLLKLPGIGAYTANAILCFGFRENTACVDANIKRVLLRLFGLDSNIQA
KDLQRKANEFLNLNESFNHNQALIDLGALICSPKPKCAICPLNPYCLGKNNLEKHTLKKK
QEIIQEERYLGVVIKNNQIALEKIEQKLYFGMHHFPDLKENLEFKLPFLGAIKHSHTKFK
LNLNLYLAATKDLKNPINFYSLKDLETLSISSMTLKILHFLKHKNLFGG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaacccaaatcaacaccgtagttgagcgtttttattccccttttttaaaa
gctttccccactttacaagatttagcgagcgctccattagaggaggttttattgttatgg
cgaggacttggctattattctagggctaaaaatttaaaaaaaagtgctgaaatttgcgtt
aaagaacatgactcacaactacctaatgactatcaaagcctattaaaactccctggcatt
ggcgcatacacggctaatgcgatcttgtgttttggctttagagaaaacaccgcatgcgtg
gatgctaatatcaaacgagtgcttttaaggctttttggattagattctaacattcaagct
aaagatttgcaaagaaaagcgaatgaatttctcaatcttaatgaaagctttaatcataac
caggctttaattgatctaggggcgttaatttgctcccctaaacccaagtgcgcgatttgc
cccttaaacccttattgtttgggtaaaaacaacctagaaaaacacacgcttaagaaaaaa
caagaaatcattcaagaagagcgttatttaggcgttgtgattaaaaacaaccaaatcgct
ttagaaaaaatagagcaaaaactctattttggcatgcatcatttccctgacttgaaagaa
aatttagaattcaaactcccctttttaggcgcaatcaaacacagccacaccaaattcaag
ctcaatttaaacctgtatctagccgctacaaaagatttaaaaaaccccattaatttttat
agccttaaagatttagaaaccttatccataagctccatgacgcttaagatcttgcatttt
ttaaaacataaaaacttatttgggggttaa
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