Helicobacter pylori SouthAfrica20: HPSA20_0256
Help
Entry
HPSA20_0256 CDS
T02807
Symbol
kdsB
Name
(GenBank) 3-deoxy-D-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00540
Lipopolysaccharide biosynthesis
hpys01100
Metabolic pathways
hpys01250
Biosynthesis of nucleotide sugars
Module
hpys_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSA20_0256 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
HPSA20_0256 (kdsB)
Enzymes [BR:
hpys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HPSA20_0256 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
Lipid A
HPSA20_0256 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
CofC
Motif
Other DBs
NCBI-ProteinID:
AGT73498
UniProt:
T1UAN0
LinkDB
All DBs
Position
complement(238673..239404)
Genome browser
AA seq
243 aa
AA seq
DB search
MIIIPARLKSSRFENKVLEDVFGLPMVVRCAKNASLVDECIVACDDESIMKACQKSRIKA
VMTSKHHNSGTERCLEAAQILGLKNDERVLNLQGDEPFLEKEVITALLEATQNAPFMATC
AKVIDEEKAKNPNLVKVVLGHQNNALYFSRSLIPFLRDADMKRQTPLLGHIGIYGFHSRE
ILEELCSLKPCVLEEIEKLEQLRALYYQKNILVKIVQSESVGIDTKEDLQNALKLFSPNL
LDR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgattatcattcctgctagattaaaatccagtcgttttgaaaacaaagtgctagaagat
gtttttggcttgcctatggtggtccgttgcgctaaaaatgcgagtttggttgatgaatgc
atagtcgcttgcgatgatgaaagcatcatgaaagcgtgccaaaaatcccgcattaaagcg
gtgatgacctccaagcaccataatagcggcacggagcgctgtttggaagcggctcaaatt
ttagggttaaaaaacgatgaaagggttttaaacttgcaaggcgatgagccttttttagaa
aaagaagtcattacagcgttgttagaagccactcaaaacgcccctttcatggcgacttgc
gctaaagtcattgatgaagaaaaagccaaaaaccctaatttagtcaaggtggttttaggc
catcaaaataacgccctgtatttttcgcgctcccttatcccctttttacgagatgctgat
atgaaacgccaaacgccccttttagggcatattggtatttacgggtttcatagcagagag
attttagaagaattatgctccttaaagccatgcgttttagaagaaatagaaaaattagag
caattgagggctttatattatcaaaaaaatatcctagtaaaaatcgttcaaagtgaaagc
gtgggcattgacacgaaagaagatttgcaaaacgccttgaagctttttagccccaatctc
cttgatcggtga
DBGET
integrated database retrieval system
