Helicobacter pylori SouthAfrica20: HPSA20_0316
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Entry
HPSA20_0316 CDS
T02807
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpys03016
]
HPSA20_0316
Enzymes [BR:
hpys01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
HPSA20_0316
Transfer RNA biogenesis [BR:
hpys03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
HPSA20_0316
Prokaryotic type
Methylthiotransferases
HPSA20_0316
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
AGT73557
UniProt:
T1U9E6
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Position
293250..294506
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AA seq
418 aa
AA seq
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MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEENEADIIIINSCTVTNGADSAVRSYAK
KMARLNKEVLFTGCGVKTQGKELFEKGFLKGVFGHDNKEKINALLHEKKRFFIDDNLENK
HLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVDLLCNKGV
QEVVLTGTNVGSYGKDKGSNIARLIKKLSQIVGLKRIRIGSLEPNQINDEFLELLEEDFL
EKHLHIALQHSHDFMLERMNRRNRTKSDRELLEAIASKNFAIGTDFIVGHPGESESVFEK
AFENLEGLPLTHIHPFIYSKRKDTPSSLMHDSVSLEVSKKRLNAIKDLIFHKNKAFRQLQ
FKRNTPLKALVEAQKDGEFKALDQFFNPIKIKSDKPLRASFLEIKEYEIKERENYAVF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtttatttcaaaacttttgggtgcaggacgaatctttttgacacgcaagtg
atgggcgagaatttaaaggattttagcgcgactttagaggaaaatgaagcggatattatt
attatcaattcttgcaccgtaactaatggggctgatagtgcggtaagaagctacgctaaa
aaaatggcacgcttgaataaggaagtgttattcaccggctgtggggtgaaaacccaaggc
aaagagctttttgaaaaagggtttttaaagggcgtttttgggcatgacaataaagaaaag
attaacgcacttttacacgaaaaaaagcgttttttcatagacgataatttagaaaacaag
cacttagacaccacgatggtgagcgagtttgtgggcaagactagggcgtttattaagatt
caagagggttgcgattttgattgcaattattgcattatcccaagcgtgagagggagggct
aggagctttgaagaaagaaagattttagagcaagtggatcttttatgcaataaaggggtt
caagaggtggttttaaccggcactaatgtggggagctatgggaaagataaggggagtaat
atcgcgcgattgattaaaaaattaagccaaattgtcgggttgaaacgcatcagaattggg
agcttagagcctaatcaaatcaacgatgagtttttagagcttttagaagaggatttttta
gaaaaacatttgcatatcgctttacagcacagccatgatttcatgttagagaggatgaac
agaagaaaccgcactaaaagcgatagggaattattggaggccatcgcttctaaaaatttt
gctatcggcacggattttattgtggggcatccgggggagagcgaaagcgtttttgaaaaa
gcgtttgaaaatttagagggcttgcctttaacgcatatccacccttttatttacagcaaa
cgaaaagacaccccctctagtttgatgcatgatagcgtgagtttggaagtttctaaaaag
cgtttgaatgcaattaaagatttgatttttcataaaaataaggcgttcaggcaattgcaa
ttcaagcgcaacacgcccctaaaagctttagtggaagcgcaaaaagacggcgaatttaaa
gccttggatcaattttttaaccccattaaaatcaaaagcgataagcctttaagggctagt
tttttagaaatcaaagagtatgaaattaaagagagggaaaattatgccgttttctaa
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