Helicobacter pylori SouthAfrica20: HPSA20_0399
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Entry
HPSA20_0399 CDS
T02807
Name
(GenBank) hemolysin TlyA family protein
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpys03009
]
HPSA20_0399
Enzymes [BR:
hpys01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HPSA20_0399
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HPSA20_0399
Ribosome biogenesis [BR:
hpys03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HPSA20_0399
23S rRNA modification factors
HPSA20_0399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
NodS
Methyltransf_9
PrmA
DUF3660
Motif
Other DBs
NCBI-ProteinID:
AGT73639
UniProt:
T1U8T2
LinkDB
All DBs
Position
complement(372761..373468)
Genome browser
AA seq
235 aa
AA seq
DB search
MRLDYALFDQHLVSSREKAKALILKNQVLVNKIVISKPSFIIKENDQIELIATNLFISRA
GEKLGAFLENHLIDFKEKVVLDVGASKGGFSEMALLKGAKKVLCVDVGKMQLDENLKKDK
RIECYEECDIRAFKTTEKIDLVLCDVSFISLYCILEAILPLSDEFLALFKPQFEVGRKIK
RNKKGVVVDKEAILNALENFKNHLKTKDFQILKIQESLVKGKNGNVEFFIHFKRA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctagattacgccttatttgaccagcatttagtgagtagcagagaaaaagcgaaa
gcactgattttaaaaaatcaggttttagtcaataaaatagtgatctctaaaccctctttt
atcattaaagagaacgatcaaattgaattaatcgccacaaatttattcattagcagggcc
ggggaaaaattaggggcttttttagaaaaccacttgatagattttaaagaaaaggttgtt
ttagatgtgggagcgagcaaggggggttttagcgaaatggctcttttgaaaggggctaaa
aaggtgctttgcgtggatgtggggaaaatgcaattagatgagaatttaaaaaaggacaaa
cgcatagaatgttatgaagaatgcgatattagagcgtttaaaacgaccgaaaaaatagat
ttagtgctttgcgatgtgagctttatttccttatattgtattttagaagcgattttgcct
ttaagcgatgaatttttggcgcttttcaaaccgcaatttgaagtgggcagaaaaataaaa
cgcaataaaaagggggtggtggtggataaagaagctattttaaacgctttagaaaacttt
aaaaaccatttaaaaacaaaggattttcaaattttaaagatccaagaaagtttagtgaaa
gggaaaaacgggaatgttgaattttttatccatttcaagcgagcctga
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