Helicobacter pylori SouthAfrica20: HPSA20_0404
Help
Entry
HPSA20_0404 CDS
T02807
Name
(GenBank) ABC transporter transmembrane region family protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HPSA20_0404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpys02000
]
HPSA20_0404
Enzymes [BR:
hpys01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HPSA20_0404
Transporters [BR:
hpys02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HPSA20_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_2
AAA_22
AAA_16
RsgA_GTPase
ABC_ATPase
DEAD
AAA_29
nSTAND1
nSTAND3
KAP_NTPase
Ribosomal_L10
AAA_5
AAA_30
cobW
DUF87
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AGT73644
UniProt:
T1U8T6
LinkDB
All DBs
Position
377007..378662
Genome browser
AA seq
551 aa
AA seq
DB search
MKLFFRRYSKYLKEHYKSFIVVLFSSLVVALSTAWGTYLVKPTLDEIFINKDTHMLKILP
FLVILAYLGKSGGMYLGTYFTNFIGLDIIKKLRNAMLESLLKMEMDFFNRTKKGELIARI
TNDIGLIRASLSNYLSESIREGLTIIGLVGVVIYQSPKLALVGLVIMPLAAIPISKIIRK
VKKLAKSHQESNAKITARLSEVFNNVEAIKISNGEKLEHKAFVKENEAFFKIGIKNIAVA
EISSPLMEFLGSIAIALVIYLGGNEVIRGHISVGAFFSFITALFMLYTPIKRLTRIVSNF
QEASVASDRIHEILEREPVIIDGALTLDSAIRTIEFKKVWLAYALDNQERYVLSDISLKF
QQNEIIALKGESGSGKSSLVNLILRLYEPSQGEIFINDQKIENITQKSLREKISVVTQRV
FIFNGSVAENVAYGLEIDGIKIKECLKKAQALDFVEKMPNGIESVLDEFGANLSGGQRQR
IAIARALYKDAQVLIFDEATSALDSATEENIKQSILELKENRLIILISHNPSTLQLATKH
VKLEHGRLIEC
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactctttttcaggcgttattctaaatatcttaaagagcattataaaagttttata
gtggttttattttcttctttagtggtcgctttaagcacggcttgggggacttatttagtc
aagcccactttagatgaaatctttatcaataaagacactcacatgctaaaaattttacct
tttttagtgattttggcgtatttaggtaagagtgggggcatgtatcttggcacttatttc
accaactttattgggcttgatattattaaaaaattacgcaacgccatgttagaaagcctt
ctcaaaatggaaatggattttttcaacaggactaaaaagggcgaattgatcgcaaggatc
accaacgacataggcttgatcagagcgagtttgtctaattacctttcagagagcataaga
gaggggctaacgattattggattagtgggggtggtgatctatcaaagccctaaattagcg
ttggtggggctagtaatcatgccattagcggccattcctattagtaaaatcattcgtaag
gttaaaaaactcgccaaatcccaccaagagagtaacgccaaaatcaccgctcgtttgagt
gaggtttttaacaatgtggaagcgattaaaatctctaatggcgaaaaattagagcataag
gcttttgtgaaagaaaatgaagcgttttttaaaatcggtatcaaaaatatcgctgtggct
gaaatttcttcgcctttaatggagtttttaggatcgattgcgatagcgttagtgatttat
ttaggggggaatgaagtgattagggggcatattagcgtgggggcgtttttttctttcatc
acagccctttttatgctttatacgccgattaaacgcttaactaggatcgtttctaatttt
caagaagcttcagtcgctagcgataggattcatgaaattttagaaagagagccggtaatt
attgatggggccttaacgcttgatagcgccattcgcaccatagaatttaaaaaagtatgg
ctcgcctatgcgctagataatcaagagcgttatgtcttaagcgatattagtttgaaattc
caacaaaatgaaatcatcgctttaaaaggcgaaagcgggagcggtaaaagttcattagtg
aatctaattttacgcctttatgagccaagccaaggcgaaattttcatcaatgaccaaaaa
atagagaatatcactcaaaaatccttgagagaaaagattagcgttgtgactcaaagggtg
tttatttttaatgggagcgtggctgaaaatgtggcgtatggtttagaaattgatggaata
aagattaaagaatgtttgaaaaaagctcaagccttagattttgtggaaaaaatgcctaat
gggatagagagcgttttagatgaatttggggctaatcttagcggagggcaacgccaaagg
atcgctattgcaagagccttgtataaagatgcacaagttttaatctttgatgaggccact
tctgctttggatagcgccacagaagaaaatatcaaacaaagcattttagaattgaaagaa
aaccgcttgatcattctcatttcgcacaacccaagcacgcttcaattggccactaaacat
gtgaaattagagcatgggcgtttgatagaatgctaa
DBGET
integrated database retrieval system
