Helicobacter pylori SouthAfrica20: HPSA20_0542
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Entry
HPSA20_0542 CDS
T02807
Symbol
glcD
Name
(GenBank) glycolate oxidase, subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00630
Glyoxylate and dicarboxylate metabolism
hpys01100
Metabolic pathways
hpys01110
Biosynthesis of secondary metabolites
hpys01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPSA20_0542 (glcD)
Enzymes [BR:
hpys01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
HPSA20_0542 (glcD)
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Gene cluster
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
YfjL_C
Motif
Other DBs
NCBI-ProteinID:
AGT73780
UniProt:
T1U8S6
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All DBs
Position
502045..503424
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AA seq
459 aa
AA seq
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MLEKQHIQYFKNLVGEEDFFTDLAHLNAYCYDATKERHLPSGVIFPKNEREISQILKYCN
EHRLIVVPRGAGSGFTGGALSVSGGLVLSVEKHLDKILEIDTKNLIARVEPGVINKHFQN
EVEKLNLFYPPDPASENQSTLGGNVAENAGGMRAAKYGITKDYVMALRVVLANGEIIRAG
KKTIKDVAGFNIAGLMIASEGCLGVISEITLKLLAKPPLKQSAMGVFNRIEDAMNAVYKT
MSSGVTPVAMEFLDNLSIKAVEERFSKGLPKDAGAILITQVDGVVKEQIAWQLNEIEKHF
KANGCVGFKVAQNEQEEQDLWFSRRNASQSISVYGKKKLNEDVTVPRASLPSLLQEVAKI
SQKYGFKIPCFGHTGDGNVHVNIMLEDPKKDLEKGHKAMEEIFQAAINLEGTLSGEHGIG
LSKAKFMPLAFNDSEMELFRNIKKALDPNNILNPFKMGL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaaacaacacattcagtattttaaaaacttagtaggggaagaggattttttc
accgatttagcgcatttgaacgcttattgttatgacgctaccaaagaaaggcatctgcct
agcggcgtgattttccctaaaaacgagcgagaaatcagccaaattttaaaatattgcaac
gagcatcgccttatcgttgtgcctaggggggctgggagcggttttacagggggagcgttg
agcgtgagtggggggctagttttaagcgtggaaaagcatttggacaaaattttagagatt
gacactaaaaatttaatcgctagagtagaaccaggcgtgatcaacaagcatttccaaaac
gaagtggaaaaattaaacttattctaccccccagatccagcgagtgagaatcaaagcact
ttaggggggaatgtcgctgaaaatgccggtggcatgcgtgcagcaaaatatggcatcact
aaagattatgtcatggctttaagggtggttttagcgaatggtgaaatcataagggcaggc
aaaaaaacgattaaagatgtcgcaggtttcaatattgcagggctgatgatcgctagtgag
gggtgtttgggcgtgatttctgagatcactttaaagcttttagctaaaccgcctctaaaa
caaagcgcaatgggggtttttaatcgtattgaagacgccatgaacgctgtttataaaaca
atgagtagcggcgttacgcctgtggcgatggaatttttagataatttgagcattaaagcg
gttgaagagaggttttctaaaggtttgcccaaagacgctggagcgatactcatcactcaa
gtagatggcgtggttaaagagcagattgcatggcaactcaatgagatagaaaagcatttt
aaagccaatggttgcgttggttttaaagtggcgcaaaacgaacaagaagagcaggattta
tggttttcaaggcgtaacgcttctcagagcattagcgtttatggtaaaaaaaagttgaat
gaagacgttaccgttcctagggcgagtttgccgagtttgttgcaagaagtcgctaaaatc
agccaaaaatacggctttaaaatcccttgctttggccatacgggcgatggcaatgtgcat
gtgaatatcatgctagaagatcctaaaaaagatttagaaaaaggccataaggctatggaa
gagatttttcaagccgctattaatttagaggggactttaagcggggagcatggcataggc
ttatctaaagccaaattcatgcccttagcgtttaatgatagtgaaatggagctttttagg
aatattaaaaaagcccttgatcctaataatattttaaacccttttaaaatggggttgtaa
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