Helicobacter pylori SouthAfrica20: HPSA20_0595
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Entry
HPSA20_0595 CDS
T02807
Name
(GenBank) hypothetical protein
KO
K23083
3-deoxy-D-manno-octulosonic acid-hydrolase
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00540
Lipopolysaccharide biosynthesis
hpys01100
Metabolic pathways
Module
hpys_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSA20_0595
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
HPSA20_0595
Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
Lipid A
HPSA20_0595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AGT73833
UniProt:
T1UBM7
LinkDB
All DBs
Position
complement(545488..546606)
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AA seq
372 aa
AA seq
DB search
MEHSRNRLKNTAFFVGLFVVLFFIAMTHQTPPYAFMHNQALVTETPPYFAQLTIPKPHDA
LSVHASTLISLPNGNLLSAYFSGTKEGAKDVKISANLFDGKSNRWGEAFILLTKEELSKN
AHEYIKKLGNPLLFLHNDKILLFVVGVSMGGWATSKIYQFESALEPIDFKFVQKLSLSPF
LNLSHLVRTKPLNTTDGGFVLPIYHELATQYPLLLKFDKHHNPRGLLRPNALNHQLQPSL
TPFKDCAIMAFRNHSFKDHLMLETCKNPTTWQKVMPTNLKNLDDSLNLLNLNGSLYLIHN
PSDLSLRRKELLLSKLENTNSFQTLKILDKANEVSYPSSSLNPYFIDIVYTYNRSHIKHI
RFNMAYLNSLLK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttggaacattcaagaaatcgcctgaaaaataccgctttttttgtggggctttttgtcgtt
ttattttttattgcaatgacacaccaaacccccccctacgcttttatgcacaatcaagcc
cttgttactgaaacccccccctattttgctcagctcactatccctaaaccccatgacgct
ttaagcgtacatgcaagcacgctaatcagcctacctaatggcaatctcttgagcgcttat
tttagcggcactaaagaaggggcaaaagatgtgaaaatcagcgctaatctttttgatggc
aaatccaatcgttggggtgaagctttcattcttttaaccaaagaagagctttccaaaaac
gcgcatgaatacatcaaaaaattgggtaatcccttacttttcttgcataacgataagatt
ttgttgtttgtcgtgggggtgagcatgggtgggtgggcaacttctaaaatctatcaattt
gagagcgctttagagccaattgatttcaaatttgtgcaaaaactctccctaagccctttt
ttaaacttgagccatttagtaaggactaaacccttaaacaccactgatggcgggtttgtg
ctgccgatctatcacgaattagccacgcaataccccttgttattgaaatttgacaaacac
cataacccaagagggcttttaaggccaaacgctttaaaccaccagctccagccaagcctg
accccctttaaagactgcgctatcatggcgtttagaaaccattcttttaaagatcacctc
atgctagaaacttgcaaaaaccccaccacttggcaaaaagtcatgcccacgaatttgaaa
aacttagacgattctttgaatttactcaatctaaacggatcgctatatctgatccataac
cctagcgatttgtccttacggcgtaaagaactcttgctttctaaattagaaaatacaaac
tcgtttcaaaccttaaaaattttggataaagccaatgaagtgagttacccaagctctagc
cttaatccttattttatagacattgtctatacctataaccgctctcatatcaaacacatc
cgtttcaatatggcttatttaaattcccttctcaagtaa
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