Helicobacter pylori SouthAfrica20: HPSA20_0640
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Entry
HPSA20_0640 CDS
T02807
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSA20_0640 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpys01007
]
HPSA20_0640 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpys03016
]
HPSA20_0640 (aspS)
03029 Mitochondrial biogenesis [BR:
hpys03029
]
HPSA20_0640 (aspS)
Enzymes [BR:
hpys01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HPSA20_0640 (aspS)
Amino acid related enzymes [BR:
hpys01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPSA20_0640 (aspS)
Transfer RNA biogenesis [BR:
hpys03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPSA20_0640 (aspS)
Prokaryotic type
Other AARSs
HPSA20_0640 (aspS)
Mitochondrial biogenesis [BR:
hpys03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HPSA20_0640 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AGT73878
UniProt:
T1UBS2
LinkDB
All DBs
Position
593342..595075
Genome browser
AA seq
577 aa
AA seq
DB search
MRSHFCTEVSEKDAGKTVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKAL
EVRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKNVNEDL
RLKYRYLDLRSLSAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPS
RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCD
ENDVMGVVEDLLQEVFKATGNSISTPFKRMPYKEAMENYGSDKPDLRFGLPLVEVGDCFM
DSSNAIFSNIAQDSKNKRIKALNVKGADATFSRSVLKELEEFVRQFGAQGLAYLQIKEDE
IKGPLVKFLSEKGLKNILERTNAQVGDIVFFGAGDKKIVLDYMGRLRLKVAEMLDLIDKN
ALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDMEEIEAYAYDVVLNGVELGGGSI
RIHKEDMQKKVFERINIDEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTQSHSI
RDVIAFPKTQKASCLLTDAPSSISEEQLRELHIRLRK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtcatttttgcacagaagttagtgaaaaagatgcgggtaaaacagtcaaagtt
gccggctggtgcaacacttatagagaccacggaggcgtggtttttattgatttaagggat
aaaagcggtttagtgcaattagtgtgtgatcctagctctaaagcttacgaaaaggcttta
gaagtgaggagcgaatttgtgctggtggctaaaggaaaggtgcgtttgaggggcgctggg
ttagaaaaccccaaactaaagaccggaaaaattgaaatcgttttagaagaattagtcatt
gaaaataaaagcgctactccgccaattgaaattggtaataaaaatgtgaatgaagatttg
cgcttgaaataccgctatttggatttacgctctttgagcgcttatgaaatctttaaattg
cgcagcgaagtggctttaattactcgtaacactctagctcaaaaaggctttttagagatt
gaaacccccattttgtctaaaaccacgcctgagggggctagggattatttagtgccaagc
agggtgcatgagggcgaattttttgcccttcctcaaagcccgcaattgttcaaacagctt
ttaatggtggggggaatggacaggtattttcaaatcgctcgttgctttagagatgaagat
ttgagggcggacaggcagccagaattcacgcaaattgatgcagaaatgagtttttgcgat
gaaaatgatgtgatgggcgtggtagaagatttgttgcaagaggtttttaaagcaactgga
aattctatttctacaccttttaaacgcatgccttataaggaagcgatggaaaattacggg
agcgataagccggatttacgctttggattgcctttagtggaagtgggggattgttttatg
gacagctccaacgctattttttctaatatcgcacaagattctaaaaacaaacgcatcaaa
gctttaaacgtcaagggggctgatgcaacttttagccgcagcgttttaaaggaattagaa
gaatttgtgcgccagtttggggctcaaggcttggcgtatttgcaaattaaagaagatgaa
attaaagggcctttagttaaatttttaagcgaaaaggggcttaaaaatattttagaaagg
actaacgcgcaagtaggggatattgtcttttttggcgcaggggataaaaaaatcgtgtta
gattacatggggcgcttgcgcttaaaggtggctgaaatgcttgatctgattgataaaaac
gctttgaatttcttatgggtagtcaatttccccatgtttgaaaaaaccgaaaatggctat
cacgccgcgcaccacccctttacgatgcctaaaaacatagaatgcgaagatatggaagag
attgaagcgtatgcgtatgatgtggtgcttaatggcgtggagcttggcggggggagcatt
aggattcataaagaagacatgcaaaaaaaagtctttgaaaggatcaatattgatgaagag
gaagcgcaaaagaaatttggctttttactagaagcgctaaaatttggcgctcctcctcat
gggggctttgcgataggctttgacagattaatcatgctaatgactcaatctcatagcatt
agagatgtgatcgctttccctaaaacgcaaaaagcttcatgtttattgactgacgctcct
agctccattagcgaagagcaactaagagaattgcacattcgtttaagaaaataa
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