Helicobacter pylori SouthAfrica20: HPSA20_0673
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Entry
HPSA20_0673 CDS
T02807
Name
(GenBank) transglycosylase SLT domain protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpys01011
]
HPSA20_0673
Enzymes [BR:
hpys01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPSA20_0673
Peptidoglycan biosynthesis and degradation proteins [BR:
hpys01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPSA20_0673
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
DUF5663
Motif
Other DBs
NCBI-ProteinID:
AGT73911
UniProt:
T1U949
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All DBs
Position
624350..626026
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AA seq
558 aa
AA seq
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MRFFILFFMGMLGVGFSQTELDLKDLEKKPAGIVRDYYLWRYISDKKTSLENAKKAYELT
QNKNNALQKAMQEKGLDNADKTPDAKMPEDIYCKQIALESMLEELDAFQNSCIAIALKSK
IKDFDKIPIQTLKILQAKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYE
KKLQIFEEHIPIKELNRLLDENYPAFNRLIYQVILDPKLDHFKDALTKSNATHSNAQTFF
ILGINEILRKKPSKALKYFERSEEVVKDDDFSKNRAIFWQYLVSKKKKTLERLSQSSALN
LYSLYANRKLKATPNYRIISHLQNLSQEDPPFNTYDPFLWQIFKEKTLSLKDEGAFNTML
KSLYYEKSAPELTYLLSQRNKDNTYYYLSPYEGIIEWQSVDEKAMAYAIARQESFLLPAL
ISRSFALGLMQIMPFNVGPFAKSLGMDNIDLNDMFNPNIALKFGNYYLNHLKKEFNHPLF
VAYAYNAGPGFLRRWLESSKRFKEKNHFEPWLSMELMPYSETRMYGFRVMLNYLIYQEIF
GNFILVDEFLEQTLTKDK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttttattttattttttatgggtatgcttggcgttggtttttctcaaaccgaa
ttggatttaaaagacttagagaaaaagcccgccgggattgttagggattattatttatgg
cgttatattagcgataaaaaaaccagtttagaaaacgctaaaaaagcctatgaattgact
caaaataaaaataacgccctacaaaaagccatgcaagaaaaaggcttagacaatgcagat
aaaacccctgatgccaaaatgcctgaggatatttattgcaaacaaatcgctttagaaagc
atgctagaagagttagacgctttccaaaatagctgtatcgctatcgctttaaaatcaaaa
atcaaggattttgataaaatccctatccaaacccttaaaatcttgcaagctaaaatcaaa
gaggcttaccccattctttatgaagaattagaaattttgcaaagtaagaatgtgagcgct
tctttgtttaaggctaacgcgcaagtgtttagcgcgctctttaaccatttgagttatgaa
aaaaagctccaaatttttgaagagcatatccctattaaggaattaaaccgccttttagat
gaaaattacccggcgtttaaccgcttgatttatcaagtcattttagatcccaagttggat
cattttaaagacgccctcactaaaagcaacgccactcatagcaacgcgcaaacttttttt
attttagggatcaatgaaattttacgcaaaaaaccctctaaagcgctcaagtattttgaa
cgatctgaagaagttgtcaaagacgatgatttttcaaaaaatagagcgattttttggcaa
tatctggtctctaaaaagaaaaaaactttagagcgcctttcacaaagctccgccttaaac
ctctatagcctttatgcaaaccgcaaactcaaagctacgcctaattaccgcatcatttcg
catctccaaaatttaagccaagaagaccctccttttaacacttacgatccttttttatgg
caaatttttaaagaaaaaactttgagtttgaaagatgaaggggcgtttaatacgatgtta
aaaagcttgtattatgaaaaaagcgctcctgaattaacctatcttttaagccaacgcaat
aaagacaatacttattattacttatccccttatgagggcattattgagtggcaaagcgtg
gatgaaaaggcgatggcgtatgcgatcgctaggcaagaaagctttttgctcccggcttta
atctctcgctcctttgctctagggcttatgcaaatcatgccctttaatgtagggcctttc
gctaaaagccttggcatggataatattgatctaaacgacatgtttaaccccaatatcgcc
cttaaatttggcaattattatttgaaccatttgaaaaaagaatttaaccacccccttttt
gtcgcctacgcctataacgctggacctgggtttttaaggaggtggttagaaagttccaaa
cgatttaaagaaaaaaatcattttgagccatggcttagcatggagcttatgccttatagc
gagactcgcatgtatggctttagggtcatgctcaattacttgatttatcaagaaattttt
gggaattttattcttgttgatgaatttttagaacaaactcttacaaaggacaaataa
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