Helicobacter pylori SouthAfrica20: HPSA20_0852
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Entry
HPSA20_0852 CDS
T02807
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00740
Riboflavin metabolism
hpys00790
Folate biosynthesis
hpys01100
Metabolic pathways
hpys01110
Biosynthesis of secondary metabolites
hpys01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
HPSA20_0852 (ribB)
00790 Folate biosynthesis
HPSA20_0852 (ribB)
Enzymes [BR:
hpys01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
HPSA20_0852 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
HPSA20_0852 (ribB)
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Gene cluster
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
RE_TdeIII
Motif
Other DBs
NCBI-ProteinID:
AGT74088
UniProt:
T1UCC1
LinkDB
All DBs
Position
complement(794913..795947)
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AA seq
344 aa
AA seq
DB search
MVLKRVTEALEAYKNGEMLIVMDDEDRENEGDLVLAGIFSTPEKINFMATHARGLICVSL
TKDLAKKFELPPMVSVNDSNHETAFTVSIDAKEAKTGISAFERHLTIDLLCKDTTKPSDF
VRPGHIFPLIAKDGGVLARTGHTEASVDLCKLAGLKPVSVICEIMKEDGSMARRGDKFLS
DFALKHNLKTLYVSDLISYRLENENLLKMFCQEEKEFLKNQTQCYTFLDHQQKNHYAFKF
KGAKANDLAPLVRFHPIKEDFDFLTTDAFEVFFKALEYLKREGGYLVFMNTHSKENNIVK
DFGIGALVLKNLGIKDFRLLSSSEDRQYQALSGFGLRLVETISL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggttttaaaacgagttactgaagctttagaagcgtataaaaatggcgaaatgctgatt
gtcatggacgatgaagacagagaaaatgagggggatttggttctagccgggattttttcc
acccctgaaaaaatcaatttcatggccacgcatgccagggggttaatctgtgtgtcttta
accaaagatctagcgaaaaaatttgaattacctcctatggttagcgtgaatgattctaac
catgaaaccgctttcacggtatccattgacgctaaagaagccaaaactgggatttctgct
tttgaaaggcatttaacgattgacttattgtgtaaagacaccacaaaaccgagcgatttt
gtgcgcccggggcatattttccctttgatcgctaaagatggaggcgtgttagcgcgcacg
ggccataccgaagcgagcgtggatttgtgcaaattggctggattaaaaccggtgagcgtg
atttgtgaaatcatgaaagaagatggttctatggcgaggagaggggataaatttttgagc
gattttgcccttaaacacaaccttaaaaccctttatgtttctgatttgatcagctatcgt
ttagaaaatgaaaatttgcttaaaatgttttgtcaagaagaaaaagaatttttaaaaaat
caaacgcaatgctacacttttttagatcaccagcaaaaaaaccattacgcttttaagttt
aaaggtgcaaaagccaacgatttagcccctttagtgcgtttccaccctatcaaagaggat
tttgattttttaacgactgatgcgtttgaagtgttttttaaagcgttagaatatttgaag
cgcgaggggggttacttggtttttatgaacacccattctaaagaaaataatatcgttaaa
gattttgggatcggggcgttagtgttaaaaaatttggggataaaagattttaggctctta
agctcttctgaagacaggcaatatcaggctttgagcgggtttgggcttagacttgtagaa
acgattagcctttaa
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