Helicobacter pylori SouthAfrica20: HPSA20_0908
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Entry
HPSA20_0908 CDS
T02807
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00541
Biosynthesis of various nucleotide sugars
hpys01100
Metabolic pathways
hpys01250
Biosynthesis of nucleotide sugars
Module
hpys_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPSA20_0908 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
HPSA20_0908 (rfaD)
Enzymes [BR:
hpys01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HPSA20_0908 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
Core region
HPSA20_0908 (rfaD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
Ldh_1_N
FCSD_central
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
AGT74143
UniProt:
T1UCI1
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Position
complement(846103..847095)
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AA seq
330 aa
AA seq
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MRYIDDELENQTILITGGAGFVGSNLAFYFQDNHPKAKVIILDKFRNNTLSSNGRPSSLG
HFKNLIGFKGEVITADINNPLDLRRLEKLHFDYLFHQAAISDTTMLNQELVMKTNYQAFL
NLLEIAQPKKAKVIYASSAGVYGNTKAPNIVGSNESPENVYGFSKLCMDEFVRSYSSDLI
QVGLRFFNVYGPREFYKEKTASMVLQLALQALAFKEVKLFEFGEQLRDFVYIEDVIQANV
KAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVSYIKNPYPFFQEHTQAHIEPTIL
DLDYTPLYDLESGIKDYLPHIHAIFKEQYA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatattgatgatgaattagagaatcaaacgattttaattaccggtggggctggt
tttgtgggcagtaatttggccttttattttcaagataaccaccctaaagctaaagtgatc
attttagataaattccgtaacaacacgctttcaagtaatggtcgcccgagttctttaggg
cattttaagaatttaatcggttttaagggtgaagtgatcacggctgatattaataaccct
ttagatttaaggcgtttagaaaagttgcattttgattatttgttccaccaggccgctatc
tctgatacgaccatgctcaatcaagaattagtgatgaaaaccaactatcaggctttttta
aaccttttagaaattgcccaacccaaaaaggctaaagtgatttacgcttcttcagcaggc
gtttatggcaacaccaaagcccccaatatcgtaggctcaaacgaaagccctgaaaatgtt
tatggtttttccaagctttgcatggatgaatttgtccgctcttattcaagcgatctcatt
caagtgggcttacgattttttaatgtctatgggcctagggaattttataaggaaaaaacc
gcctccatggttttgcaactcgctttgcaagcgttggcgtttaaggaagtcaagcttttt
gaatttggcgagcagttaagggattttgtctatattgaagatgtgatccaagcgaatgtg
aaagcgatgaaagctcaaaaaagcggggtttataatgtgggctattcacaagccaggagc
tataatgagattgttagcattttaaaagagcatttaggggattttaaagtgagttatatt
aaaaacccttatccttttttccaagagcacacgcaagcgcatattgaacccactattttg
gatttagactacacccccttatacgatttagaaagcggcattaaggattatttgccccat
atccatgcgatttttaaagaacaatacgcatga
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