Helicobacter pylori SouthAfrica20: HPSA20_0966
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Entry
HPSA20_0966 CDS
T02807
Name
(GenBank) uvrD/REP helicase family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys03420
Nucleotide excision repair
hpys03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPSA20_0966
03430 Mismatch repair
HPSA20_0966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpys03400
]
HPSA20_0966
Enzymes [BR:
hpys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPSA20_0966
DNA repair and recombination proteins [BR:
hpys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPSA20_0966
MMR (mismatch excision repair)
Other MMR factors
HPSA20_0966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
AAA_12
Viral_helicase1
ZapG-like
Motif
Other DBs
NCBI-ProteinID:
AGT74199
UniProt:
T1UA95
LinkDB
All DBs
Position
898102..899598
Genome browser
AA seq
498 aa
AA seq
DB search
MKNTKKKHNYIDYNDLLLLFKKAMLETPSPYKEVLCDEFQDTNPLQESILDAINPPSLFC
VGDYDQSIYAFNGADISIISNFTQKYKNARVFTLTKNYRSSKEILDLANQVIQHNQRIYP
KNLEVVKSGDFNKPTLLNYDDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALR
ANNVPSKRKGSASFFESKEVALALDICTLVFNPKDIMAAIHVLSYANDIGSNTAKDIHEA
LMLLGNGDLKSALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIAKAFHSHPI
LMHPKISLNGAKMLSDFFTLYTHAPNSPSALIKHTIESAFFQTIKTRLLKERSKNKDGSY
NEFKKLQAQKRFNEKMELLSSLAKNYQDLGRFLNGTLIGSNEATQGEGVNLLSVHASKGL
EFKDVYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKP
KEHKPSVFLYEAGLLKPQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacaccaaaaaaaagcacaattatattgattataacgacttgttactgctcttt
aaaaaagcgatgctagagacgcctagcccttataaagaagtgctttgcgatgaatttcaa
gacaccaaccccttacaagaatccattttagacgctatcaacccccctagcctattttgc
gtgggcgattacgatcaaagcatttacgcttttaatggggcggatatttctatcatttct
aatttcactcaaaaatacaaaaacgcccgggttttcacgctcactaaaaactaccgctct
tctaaagaaattttagatctcgctaaccaagtgatacagcacaaccaacgcatttaccct
aaaaatttagaagtggtgaaatcaggggattttaacaagcccacgcttttaaattatgac
gacaatatcgcgcaatgccaagacatcgccaaacgcattgtcatgcggaagaattttaaa
gaagtggcagtgatttttaggaataatgcaagcgcggatcaattagaagccgctttaaga
gctaacaatgtgccaagcaaaagaaaggggagcgcgagtttttttgaatccaaagaagtg
gcgttagcgttagatatttgcacgctggtgtttaaccctaaagacattatggcagccatt
catgttttaagctatgcgaatgatattggctctaacaccgctaaagacattcatgaagcc
ttgatgcttttaggcaatggggatttgaaatcagccctaacccaccccaataaagaagcc
aaaatttacaccaagaaaaaagaaatcacctccatggggctttttgaagaaatttttgct
ttagaaaacagctcaaggtttaatagcgtgatcgctaaggcgtttcattcgcacccaatt
ttgatgcaccctaaaatctcactcaatggggctaaaatgttaagcgattttttcactctc
tacacccatgcccctaattcccctagcgctttaatcaaacacaccatagaaagcgcgttt
tttcagacgattaaaacacgccttttaaaagagcgctccaagaataaggacggatcttat
aacgaatttaaaaaactccaagcgcaaaaacgcttcaatgaaaaaatggaattactgagc
tctttggcgaaaaattaccaggatttagggcgttttttaaacggcactttaataggatca
aatgaagccacgcaaggcgagggcgtgaatttattgagcgtgcatgcttctaaaggcttg
gaatttaaagacgtttatatcattgatttaatggaggggcgtttccctaaccataagctt
atgaataccggtgggggcattgaagaagaaaggcggcttttttatgtcgctatcacaagg
gctaaggaaaatttatggctttcttatgcaaaaaacgaattgagggaaaacgccaaacct
aaagagcataagccttcggtgtttctgtatgaagcggggcttttgaaaccgcaataa
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