Helicobacter pylori SouthAfrica20: HPSA20_0967
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Entry
HPSA20_0967 CDS
T02807
Name
(GenBank) outer membrane family protein
KO
K15843
outer membrane protein HopC/AlpA
Organism
hpys
Helicobacter pylori SouthAfrica20
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
Motif
Other DBs
NCBI-ProteinID:
AGT74200
UniProt:
T1U9Z3
LinkDB
All DBs
Position
900868..902424
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AA seq
518 aa
AA seq
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MTKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGTKRDELARELNADV
TNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPENLNGNDVAANALLQGAVGNGTCAAAG
TAGSSSLNTQSACTAAGYYWLPSLTDRVLSTIGSQANYGTDTNFTNMQQQLTYLNAGNVF
FNAMNNALESITKNRNTASTSGATGQNGQTYSTQAIQYLKDQQTILNNAANLLKQDELLL
EAFNSAVAANIGNKEFNSAVFTGLVQGIIDQSQAVYNELTKNTISGSAVNGAGINSNQAN
AVNTRASQLPNALYNAEVTLNKINALNNQVRSMPYLPQFRAGNSRSTNIMNGFYTKIGYK
QFFGKKRNIGLRYYGFFSYNGASVGFRSTQNSVGLYTYGVGTDVLYNIFSRSYQNRSVDM
GFFSGIQLAGETVQSTLRDDPNVKLHGTVNNTHFQFLFDFGMRMNFGKLDGKSNRHNQHT
VEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaaaatagaacgctgtttcttagtctagccctttgcgctagcataagttat
gcagaagatgatggagggttttttaccgtcggttatcagctcgggcaagtcatgcaagat
gtccaaaacccaggtggcactaaaagggacgaactcgcaagagagcttaacgctgatgtt
acgaacaacattctcaacaacaacaccggaggcaatgtcgcaggggcgttgagtaacgct
ttctctcaatacctttattcgcttttaggggcttatccggagaatctcaatggtaatgat
gtggctgcgaacgctcttttacaaggcgcggtaggcaatgggacttgtgcggctgcaggg
acggctggcagcagttctcttaacactcaaagcgcttgtaccgctgcgggctattactgg
ctccctagcttgactgatagggttttaagcacgattggcagccaagccaactacggcaca
gacaccaatttcactaacatgcagcaacagctcacttacttgaatgcggggaatgtgttt
tttaatgcgatgaacaacgctttagagtcaataactaagaatagaaacactgctagcact
agtggtgcaactggtcaaaatggtcaaacttactctacacaagctatccaataccttaaa
gaccaacaaaccattctcaataacgcagcgaacttgctcaagcaagatgaattgctttta
gaagctttcaactctgccgtagccgccaatattgggaataaggaattcaattcagcggtt
tttacaggtttggtgcaaggcattattgatcaatctcaagcggtttataacgagctgact
aaaaacaccattagcgggagtgcagttaatggagctgggataaatagcaaccaagccaac
gctgtgaacacgcgcgccagtcagctccctaacgctctttacaacgcagaagtaaccttg
aataagatcaacgcgctcaacaatcaagtcagaagcatgccttatttgcctcaattcaga
gccgggaacagccgttcaacgaatatcatgaacgggttttacaccaaaataggctataag
caattctttgggaagaaaaggaatatcggcttgcgctattatggcttcttttcttataac
ggagcgagcgtgggctttagatccactcaaaatagcgtagggttatacacttatggggta
ggcactgatgtgttgtataatatctttagccgctcgtatcaaaaccgctctgtggatatg
ggcttttttagcggtatccaattagccggtgaaaccgtccaatccacgctcagagatgat
cccaatgtgaaattgcatggcacagtcaataacacgcatttccaattcctctttgacttc
ggtatgcgcatgaacttcggtaaattggacgggaaatccaaccgccacaaccagcacaca
gtggaatttggcgtagtggtgcctacgatttataacacttattataaatccgcagggact
accgtgaagtatttccgtccttatagcgtttattggtcttatgggtattcattctaa
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