Helicobacter pylori SouthAfrica20: HPSA20_0982
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Entry
HPSA20_0982 CDS
T02807
Name
(GenBank) tRNA pseudouridine synthase, TruD family protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpys03016
]
HPSA20_0982
Enzymes [BR:
hpys01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPSA20_0982
Transfer RNA biogenesis [BR:
hpys03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPSA20_0982
Prokaryotic type
HPSA20_0982
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
AGT74215
UniProt:
T1UA09
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All DBs
Position
925116..926261
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AA seq
381 aa
AA seq
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MNLNLMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVKIAELGYAGLKDKNALTTQFVSLPKKYAPLLEKNTSNFQERNLKILSLNYH
HNKIRLGHLKGNRFFMRFKKMTPLNAHKTEQVLEQIAQFGMPNYFGSQRFGKFNDNHQEG
LKILQNETKFKNQKLNAFLISSYQSYLFNSLLSKRLEISKIISDFSLKEGLEFFKQKHLN
IHSNALKALKNQNHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQNPILSNHAKTLGSRRFFWVFAENLTSKYIKEKAQFELEFYLPKG
SYASALLKEIKHEKGENNDAF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaccttatgcccttattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaatttagtaac
acaggcgaacatgccgttattcaagtgaggaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaaaaatcgccgaattgggttatgcaggcttgaaa
gataaaaacgcgctaacgactcaatttgtctcactccctaaaaaatatgcccccctacta
gaaaaaaacacgagcaactttcaagaaagaaaccttaagattttatctttgaattaccac
cacaataagatcagattagggcatttaaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcacaaaacagagcaggttttagaacaaattgcgcagtttggc
atgccgaattattttggctcacaacgcttcgggaagtttaacgacaaccaccaagagggt
ttaaaaatcttacaaaatgaaacgaaattcaagaatcaaaaattaaacgctttcttaatc
tcaagctatcaaagttatttgttcaattcgcttttaagcaaacgattagaaatcagtaaa
atcatcagcgatttcagtttaaaagagggtttagagttttttaaacaaaaacatttaaat
atccattcaaacgccctaaaagcccttaaaaaccaaaatcacccctttaaaatcctagaa
ggcgatgtgatgtgccactacccttatgggaagttttttgacgctttagaattagaaaaa
gaaagcgaaaggtttttaaaaaaagaagctgcacctaccgggttattagacggcaaaaaa
gctctttatgcaaaaaatttgagtttggaaattgaaaaagaattccaaaaccccatttta
agtaaccatgctaaaacgctaggctctaggcggtttttttgggtgtttgcagaaaattta
acttccaaatatatcaaagaaaaagcgcaatttgaattggaattttacttgcctaaaggg
agttatgcaagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataacgatgca
ttttga
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