Helicobacter pylori SouthAfrica20: HPSA20_1248
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Entry
HPSA20_1248 CDS
T02807
Name
(GenBank) outer membrane family protein
Organism
hpys
Helicobacter pylori SouthAfrica20
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_OMP_2
Motif
Other DBs
NCBI-ProteinID:
AGT74467
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Position
1178089..1179504
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AA seq
471 aa
AA seq
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MKKASQVLFFGAFLSSSLQGFEAKLDGFVNQSSTIGFNQHKINKERGIYPMQQFATIAGY
LGLGFNLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNIL
QTDSLETQNMKHNKNVRDYVFSDAYLEYAYKNYFEFKGGRYLSTMPYKSGQTQGFQLSGQ
YKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGYKVLYGTHAVQL
TYKPHRFLIEGFYYFSPQIFNAPGVKIGWDSNPNFSGTGFRSDTAIIGFFPIYYPWMIVK
ANGSPVYKYDTPATQNGQNLIIRQRFDINNYHVAIALYKVFQNANGWIGNMGNPSGVMMS
GNSVYAGFTGTALKRDAATIFLSCGGTHFAKKFTWKFATQYSASVVSWEARAMLSLGYKF
SEYLSGSIDLSYYGVHTNKGFKPGENGPVPKNFPALYSDRSALYTALIASF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggcaagtcaggttttattctttggagcatttttaagctcttctttgcaaggt
tttgaagccaagctcgatggctttgtgaatcaatccagcactatcggttttaaccaacac
aaaatcaataaagaaagaggcatctaccctatgcagcaattcgcaacgattgcgggttat
ttagggcttggttttaacctactccccaaaaaggtttcagatcatgttctaaaaggcaaa
ataggaggcatggtaggatctattttctatgacggcacaaagaagtttgaagacggctct
gtggcttacaacctctttggttattatgatgggtttatggggggctatacgaatatctta
caaaccgatagccttgaaacacaaaacatgaaacacaataaaaatgttcgtgactatgtc
tttagcgatgcgtatttagaatatgcctataagaattattttgaatttaaaggcgggcgc
tacctctccaccatgccttataaaagcgggcaaacacaaggctttcaactctctgggcaa
tacaagcatgcacgcttgacttggtttagctcttttgggagggcgttcgcttacggctcg
tttttaatggattggtttgccgctaggaccacttatagcggaggctttaccaaaaacgat
aaagggggttatgatagtcatgggtataaggtgctttatggcacgcatgcggtgcagctc
acctataaacctcatcgttttctcatagaaggcttttattacttttcgcctcaaattttc
aacgctccaggcgttaagattggctgggattccaaccctaatttcagcggcacaggcttt
cgctctgatacggctatcatagggttttttcccatttactacccttggatgattgttaaa
gccaatgggagtccggtctataaatacgacacgccagccactcaaaatgggcaaaatctc
attatccgccaacgctttgatataaacaattaccatgttgcaatcgctctttataaagtc
tttcaaaacgctaatggctggataggcaacatggggaatccaagcggtgtgatgatgtca
ggtaacagcgtgtatgccggtttcacaggcacagcccttaaaagagatgccgctacgatt
ttcctttcttgcggcggcactcattttgcgaaaaaattcacatggaaattcgccacgcaa
tattccgcctctgtggtctcttgggaagcgagagcgatgctctctttaggctataaattc
tctgaatatttgagcggcagcattgatctttcatattatggggtgcataccaacaaaggc
tttaaaccgggtgaaaacgggcctgtgcctaaaaacttcccggctctttattctgacagg
agcgctttatacacagccctaatagcgtctttttaa
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