Helicobacter pylori SouthAfrica20: HPSA20_1277
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Entry
HPSA20_1277 CDS
T02807
Symbol
rfaF
Name
(GenBank) lipopolysaccharide heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys00540
Lipopolysaccharide biosynthesis
hpys01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSA20_1277 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
HPSA20_1277 (rfaF)
Enzymes [BR:
hpys01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
HPSA20_1277 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
hpys01005
]
Core region
HPSA20_1277 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
AGT74495
UniProt:
T1UAV3
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All DBs
Position
1205912..1206961
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AA seq
349 aa
AA seq
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MNMITPKRMRILLRLPNWLGDGVMASSLFYTLKNHYPNARFVLVGPKITCELFQKDEKIE
AVFTDDTKKSFFRLLATYKLAQKIGRCDMAIALNNHFYSAFLLYATKTPVRIGFAQFFRS
FFLSHAITAAPKEYHQVEKYCFLFSQFLKKELDQKSVLPLKLAFNLPAHTPNTPKKIGFN
PSASYGSAKRWLASYYAEVAATLLEKGHEIYFFGAKEDAIVSEEILKSVKGLLKNPLLFN
NAYNLCGETSIEELIERIATLDLFITNDSGPMHVAAGTQTPLIALFGPTDEKETSPYKAQ
KAIVLNHHLSCSPCKKRVCPLKNEKNHLCMKSITPIEVIQATSTLLEEG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatcacacccaaacgcatgcgtattttattgcgtttgcctaattggttaggc
gatggggtgatggcaagctcgcttttttacacccttaaaaaccactaccctaacgcgcgt
tttgtcttagtgggcccaaaaatcacttgcgaacttttccaaaaagatgagaaaatagaa
gccgtttttacagacgacaccaaaaaatcctttttcaggttactagccacctacaaactc
gctcaaaaaatagggcgttgcgatatggctatcgctttaaacaaccatttttattccgct
tttttgctctatgcgacaaaaacgcccgttcgcatcggttttgctcaattttttcgttct
tttttcctaagccatgcaataactgctgcccccaaagagtatcatcaagtggaaaaatat
tgctttttgttttcgcaatttttaaaaaaagaattggatcaaaaaagcgttttaccctta
aaactagcctttaacctccccgctcacaccccaaacacccctaaaaaaatcggctttaac
cctagcgcaagctatgggagcgctaaaaggtggttggcctcttattacgctgaagtcgcc
gctactttgttagaaaaagggcatgaaatttatttttttggggctaaagaagacgctatc
gtttctgaagaaattttaaaatccgttaaaggcttgttgaaaaaccccttattattcaat
aacgcttataatctgtgcggagaaaccagcattgaagaattgatagagcgcatcgctact
ttagatttattcatcactaacgatagcggtcctatgcatgtggctgctggcacacaaacc
cccttaatcgctctttttggccccactgatgaaaaagaaactagcccctataaagcccaa
aaagccattgtattaaaccatcatttaagctgttcgccttgcaaaaaacgagtctgcccc
ttaaagaatgaaaaaaaccatttgtgcatgaaatccatcacgcccattgaagttattcaa
gccacttctacgcttttagaagagggttaa
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