Helicobacter pylori SouthAfrica20: HPSA20_1398
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Entry
HPSA20_1398 CDS
T02807
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPSA20_1398 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpys03021
]
HPSA20_1398 (rpoA)
03400 DNA repair and recombination proteins [BR:
hpys03400
]
HPSA20_1398 (rpoA)
Enzymes [BR:
hpys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPSA20_1398 (rpoA)
Transcription machinery [BR:
hpys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPSA20_1398 (rpoA)
DNA repair and recombination proteins [BR:
hpys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPSA20_1398 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
AGT74609
LinkDB
All DBs
Position
complement(1310810..1311844)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPIGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSEITRELMPEGYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGEKPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEDELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggtaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
caccctattagaaggctcttgcttttaagctcggtggggtatgctcctataggtttaaaa
attgaaggcgttcatcatgagtttgattcattaagaggcgttactgaagacgtgtcgctt
tttatcatgaatttaaagaatatccgttttatagccaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggaacttagg
gctagggatttaaattctgagcatatagaaatcgtcaatcctgaaatgcccctagccacg
atcaacgaagacgctcaattgaatttttcgctcatcatttataaaggaatggggtatgtc
ccaagcgaaatcacaagagagttgatgcctgaaggttacatgccgctagatggctctttc
acgccgattaaaaatgtggtttatgagattgaaaatgttttggttgagggcgatcctaac
tatgaaaaaatcatctttgatattgaaacagacgggcaaattgacccttacaaagcgttt
ttatcagcggtgaaagtgatgagcaaacagctaggcgtttttggtgaaaaacccattgct
aacacggagtattcaggcgattacgcccaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagcgccaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggtgaactcgttttaatgagcgaagatgagcttaagggcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgccgaaaaattgaatgatttgggctatcctgtaggcaca
gaattaagccctgaacaaagagagagtttgaaaaaaagattagaaaaattagaagataaa
ggaggcaatgactga
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integrated database retrieval system
