Helicobacter pylori SouthAfrica20: HPSA20_1546
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Entry
HPSA20_1546 CDS
T02807
Name
(GenBank) exonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPSA20_1546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpys03400
]
HPSA20_1546
Enzymes [BR:
hpys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPSA20_1546
DNA repair and recombination proteins [BR:
hpys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPSA20_1546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KASH_CCD
KELK
DUF2524
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
AGT74754
UniProt:
T1UBQ4
LinkDB
All DBs
Position
complement(1429845..1430105)
Genome browser
AA seq
86 aa
AA seq
DB search
MQDDLFEAEKAPPKNTKTAKNAPKKSFEEHVHSLEQAIERLNDPNLSLKDGMDLYKTAMQ
ELFLAQKLLENAYLEYEKLQTPDKKA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatgatttatttgaagctgaaaaagcccccccaaaaaatactaaaaccgctaaa
aacgctcctaaaaaaagttttgaagagcatgttcattctttagagcaagccatagagcgc
ttgaatgatcctaatttgtctttaaaagacgggatggatttgtataaaacggccatgcaa
gaattgtttttggcgcaaaaacttttagaaaacgcttacttagagtatgaaaaactccaa
acgccagataaaaaggcttaa
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