KEGG   Helicobacter pylori SouthAfrica20: HPSA20_1610
Entry
HPSA20_1610       CDS       T02807                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hpys  Helicobacter pylori SouthAfrica20
Brite
KEGG Orthology (KO) [BR:hpys00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpys02048]
    HPSA20_1610
Enzymes [BR:hpys01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HPSA20_1610
Prokaryotic defense system [BR:hpys02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HPSA20_1610
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD AAA_22 FANCI_S2
Other DBs
NCBI-ProteinID: AGT74817
UniProt: T1UD29
LinkDB
Position
1490185..1493160
AA seq 991 aa
MKTEKEFQKQVIETFKRMGYAYLGDLKKSDNENINKESLKAWLIKNQKIEPERWRKIEHK
IHDALKNDLYEANQKFYELLIYGVKTKINQNENFQTTWLIDWKDVSQNEFSVAEEVSVKG
PNAKRPDIVLYINGIALGVLELKKSSVSVESGIRQNLDNQKKEFIRDFFKTIQLVMAGNE
SQGLRYGVIETKEKYYLPWKEEGVQKNLFETIECFLKKERFLEFIHDFLIFDKGQKKCAR
FHQYFAIKKTQEFIKRKEGGIIWHTQGSGKSLTMVWLARWLRRNIQQARILIVTDRRELD
AQIQGVFEGIGENLYRTDSKKDLLSVLFENKECLVGTLVHKFDDNDLEDLKKQPVLKEWI
VLVDECHRTQSAKLHKAMKSLLPNAIFIAFSGTPLLKQDKKTSQEVFGNYIHCYKFNEAV
SDKVVLDLNYEARSVEQYVSSPEKLDEYFELKTQGLNETAKTELKKKWVNLQKVFSTKDR
LARIVQDIVLDMAKLPRLRNGKGNAMLVAESVYNACRYFELFLETELKDKVAVITSYEPG
IADLKDCGSDESEESHQYRAYCKMLQNFFNEKDEKKALNKIKEFEEKVKERFINEPNRMK
LLIVVDKLLTGFDAPSLTYLYMDKKMQDHGLFQAVCRVNRLDSEDKDFGCIIDYSDLFDS
LQEAHSDYTNKAFENYEREDIQGLISDKAQKIKKRLEETRDQLKSLCEGVKEPKDEEDYI
AYFCGSDLEKNAQKRRLFYQLVGAFLRMFVELNHLEKPIYSKEEMQQIKQEAEFYRHLQK
VIGLSSGDSVDLKSYSEEMRRILDAYIKATDSETLIKVEDQGLCEVLAQMDIDDFNKALS
QVFKNESSMAESIANNTRKRIIEKEASDPKYYEKLSSLLNDLILQFREKKLTYLEYLQQI
QDLAKQVINKENKDYPISINTKALKTLYDNSGQDENLALKIDECIRGHKKADWVGHSVKE
RSLKNALKKIIGDEVLLENIFNLAKHIDEYQ
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgaaaacagaaaaagaatttcaaaaacaagtcatagaaacttttaaaagaatgggctat
gcgtatttaggggatttaaaaaagagcgataatgaaaacatcaataaagaaagcttgaaa
gcatggctaattaaaaatcaaaaaattgagcctgaaaggtggcgtaaaattgagcataaa
atccatgacgctttaaaaaacgatttatacgaagcgaatcaaaaattttacgagcttttg
atttatggcgtgaaaactaaaataaaccaaaatgaaaacttccaaacgacttggctcatt
gattggaaagacgtttctcagaatgaatttagcgtggctgaagaagtgagcgttaaaggg
ccaaacgcaaaacggccggacatcgtgctttacattaatgggatcgctttaggggtgcta
gaattgaaaaaatccagcgtgagcgtggaaagcggtatcagacaaaatttagacaaccaa
aagaaagaatttattagagatttttttaaaacgatccagttggttatggcgggcaatgaa
agtcaagggttaagatatggcgtcatagaaactaaagaaaaatactaccttccttggaaa
gaagagggcgttcaaaaaaatttgtttgagacgattgaatgctttttaaaaaaagaaagg
tttttagaatttatccatgattttttgatttttgataaggggcaaaagaaatgcgccaga
ttccaccagtattttgcaattaaaaaaacgcaagaatttatcaaaagaaaagaagggggg
attatctggcacacgcaaggcagcggtaagagcttgactatggtgtggcttgctagatgg
ctaagaagaaatatccaacaagcaaggattttaatcgttacggacaggagggaattagac
gctcaaattcaaggcgtgtttgaaggaataggcgagaatctttatcgtacagacagcaag
aaggatttgttgagcgtgctgtttgaaaataaggaatgtttggttggaacgcttgtccat
aaatttgatgacaatgacttagaagacttaaaaaagcaacctgttttaaaagagtggatt
gttttagtggatgaatgccacagaacccaaagcgctaaattgcataaagccatgaaaagc
ctgctccctaatgcgatttttatcgcctttagcggcacgcctttattgaaacaagataaa
aagacaagtcaggaagtgtttgggaattatatccattgctataaatttaatgaagccgtt
agcgataaggtggtgctagatttaaactatgaagccagaagcgtggaacaatatgtcagt
agccctgaaaagctagacgaatattttgaattgaaaacccaaggcttgaatgagacggct
aaaacagagcttaaaaagaaatgggttaatttgcaaaaggttttttccactaaagacaga
ttggctcgtattgtgcaagatattgtattggatatggcaaaactcccacgattaaggaat
ggaaaggggaatgccatgctggtggctgaaagcgtgtataacgcatgccggtattttgaa
ctctttttagaaacagaattaaaggataaggtggctgtgatcacaagctatgaacccggt
atcgctgatcttaaagattgcgggagcgatgagagcgaagagagccaccaataccgcgct
tattgtaaaatgctgcaaaacttttttaatgaaaaagatgagaaaaaagcccttaataaa
attaaagagtttgaagaaaaagttaaagagcgttttattaatgagcctaatagaatgaag
ctgttgatcgtggtggataagctattgaccggttttgatgcaccaagcctcacttattta
tacatggataaaaaaatgcaagatcatgggctttttcaagcggtgtgcagggtgaataga
ctggatagcgaagataaggattttggctgtatcatagactatagcgatttgtttgacagc
ctgcaagaagcgcacagcgattacaccaataaagcgtttgaaaactatgaaagagaagac
attcaagggctgatctctgacaaagcccaaaagattaagaaaagattagaagaaactaga
gatcagttaaaatcgctttgtgaaggcgtgaaagaaccaaaagatgaagaggattatatc
gcttatttttgtgggagcgatttagaaaaaaacgctcaaaaaaggcggttgttttaccag
cttgttggcgcgtttttaaggatgtttgtggaattgaaccatttagaaaagcccatttat
tctaaagaagaaatgcaacaaatcaaacaagaagcggaattttacaggcatttacaaaag
gtgattggcttgagtagtggggatagcgtggatttaaaaagctatagcgaagagatgcgc
cggatcttagacgcttacattaaagccacggatagcgagacgctaatcaaagtagaagat
caagggctgtgcgaagttttagcccaaatggatattgatgatttcaataaggcgctgtct
caagtatttaaaaatgaaagctctatggcagaaagcatcgctaacaacaccagaaaacgc
attatagaaaaagaagcgagcgaccctaagtattacgaaaaattatcttcgcttttaaac
gatttgattctccaatttagagaaaagaaattaacctatttagaatacttgcaacaaatc
caggacttagccaaacaagttatcaataaagaaaacaaagactaccctataagcattaac
actaaggctttaaaaaccctctatgataattcagggcaagatgaaaatttagccttaaaa
atagatgagtgcataaggggtcataaaaaagctgattgggtggggcattctgtcaaagaa
agaagccttaaaaacgctttgaaaaaaatcataggcgatgaggttttgttagaaaacatc
tttaatttagccaaacatatagatgagtatcaatag

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