Helicobacter pylori SouthAfrica20: HPSA20_1627
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Entry
HPSA20_1627 CDS
T02807
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Pathway
hpys03030
DNA replication
hpys03430
Mismatch repair
hpys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSA20_1627
03430 Mismatch repair
HPSA20_1627
03440 Homologous recombination
HPSA20_1627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpys03032
]
HPSA20_1627
03400 DNA repair and recombination proteins [BR:
hpys03400
]
HPSA20_1627
Enzymes [BR:
hpys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSA20_1627
DNA replication proteins [BR:
hpys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSA20_1627
DNA repair and recombination proteins [BR:
hpys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSA20_1627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGT74834
UniProt:
T1UBX5
LinkDB
All DBs
Position
complement(1509575..1510201)
Genome browser
AA seq
208 aa
AA seq
DB search
MPINLLHKDIQALIARLKNQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFIETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPIKHEILEIGAVQVSGGKIINRFETLVKVKSVPDYI
SDLTGIAYEDTLNAPSVYEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSRRAILSMRYSLSFFKRAFRV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgccaataaacctcttgcataaagatattcaagccctaatcgctcgcttaaaaaaccag
gatttaagcttgggcatgctagaaaagtcgctctctcgccttatctatgatgaaatcaat
ttggagtatttaaaagcgtgcggacttaatttcatagaaacaagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaagttttttcctttattgatctagagacc
accggatcttgccccataaagcatgagattttagaaatcggggccgtgcaagtgagcggt
gggaaaatcattaatcgttttgaaaccctcgtgaaagtcaaaagcgttcctgattatatt
tctgatcttacaggcattgcttatgaagacaccctaaacgccccaagcgtttatgaagcc
ttgcaagaattgcggctttttttgggcaatagcgtgtttgtggcccataacgctaatttt
gattacaactttttagggcgttattttgtggaaaaattgcattgccctttattgaattta
aagctttgcactttggatttatccaggcgcgcgattttgtccatgcgctattctttgagt
ttttttaaaagagcttttagggtttga
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integrated database retrieval system
