Helicobacter pylori UM066: K751_00380
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Entry
K751_00380 CDS
T02660
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpyu
Helicobacter pylori UM066
Pathway
hpyu03420
Nucleotide excision repair
hpyu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K751_00380
03430 Mismatch repair
K751_00380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyu03400
]
K751_00380
Enzymes [BR:
hpyu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K751_00380
DNA repair and recombination proteins [BR:
hpyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K751_00380
MMR (mismatch excision repair)
Other MMR factors
K751_00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGL70666
LinkDB
All DBs
Position
complement(1564731..1566776)
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILDNLNEAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE
TKTLCKQLKISSFRASISQIKNGMIDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNETIAKETSERYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSVEILACANSLISHNQHRHKKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALAFMHLTAKKDDRFFIRRVLNKPSRGLGKITQELIFSLLDGENLN
LEEALKLGVFKGKLNPKNEHALKQFIAMIGRLREAFEISVEEFCARFLEETNLLKSYEKE
DNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESVLDTHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKIS
CSPSVFLEEAKLLNQDNPPKQNHQKNTPIKVGDLIKHKIFGTGRVLGVEKGLSGVCLKIN
CGGNVYDKISEKFVEKVDNEF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttagacaatttaaacgaagcgcaaaaaattgccgcaagc
cacattcaagggcctttgctgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggtgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagcaaagaaatgcaagaaagggctttgaaattgttgaaa
aaccaaacccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgagccttttaaaaagagcgtgcgatttttcggtgttagacagcgatgag
acaaaaacgctgtgcaaacagctcaaaatttcaagctttagagccagtatttctcaaatc
aaaaacggcatgattgatttaagcatgcaagatagcgaatgttataaagcgtatgagctt
tatcaaaacgcgcttaaaaaagacaatttagtggattttgacgatttgctttttttaagc
cttaagattttacaagataatgaaaccatcgccaaagaaactagcgagcgctaccattat
attatggtagatgagtatcaagacacgaacgccttgcaattagaatttttaaaaaaattg
agtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaggtg
gtgaaattagaaaccaactaccgctccagcgttgaaattttagcgtgcgctaactccctg
attagccataaccaacaccgccacaaaaaaacgcttcaaagttttaagggctcgcataaa
agcgtggtttgtaaggaatatttgacgcaaaaagaagagagcttagatgtggcttatcaa
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtatcgctta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccctataggctt
attggagcggtgagtttctatgaaagagcagaggttaaagacgctttggcgttcatgcat
ttaacggctaaaaaagacgatcgctttttcatcaggcgcgttttaaacaagccctcaaga
ggtcttggtaagatcactcaagagttgattttttctcttttagatggtgagaatttgaat
ttagaagaagccctaaaactaggggtgtttaaaggcaaattaaaccctaaaaacgaacac
gctttgaaacaatttatcgctatgatagggcgtttgagagaggcttttgaaatttcagtg
gaggagttttgcgctcggtttttagaagaaaccaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgttaaagagcttttaagcttagtgaaagagcat
tttaaaactaaccccacgcattctttactggattttttgaatgaaagcgttttagatacc
cacaatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaagggctta
gaatttaagcatgtgtttgtgattgggttagaagaagggtttttcccgcataggggattc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttatgtagcgatcactagggct
aaagaaggattgcaactctcttatgtgaaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaggccaagttgctcaatcaagacaacccccctaaa
caaaatcaccaaaaaaatacgcccattaaagtgggggatttgatcaaacataagattttt
ggcaccggtagggttttaggcgtagaaaaaggcttgagcggtgtgtgcttgaaaatcaat
tgtggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataacgag
ttttga
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