Helicobacter pylori UM066: K751_03860
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Entry
K751_03860 CDS
T02660
Name
(GenBank) UvrABC system subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hpyu
Helicobacter pylori UM066
Pathway
hpyu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K751_03860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyu03400
]
K751_03860
DNA repair and recombination proteins [BR:
hpyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K751_03860
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K751_03860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
nSTAND3
AAA_16
DnaJ_CXXCXGXG
AAA_21
APS_kinase
SLFN-g3_helicase
Viral_helicase1
AAA_23
AAA_15
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AGL71345
LinkDB
All DBs
Position
complement(853991..856798)
Genome browser
AA seq
935 aa
AA seq
DB search
MDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSY
ARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGEQFC
PTCLEPISSMSASDIISQICHLEENSKIIILAPIIKDKKGSFNDKLESLRLKGYVRAFVD
GVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASAVEKALKESYGELEVEILQDN
APSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKILDPNT
PLNQGAIKVIFGYNRSYYAQMFEGFCEYNGIDTALCFNELNKEQQDALLYGNGTEISFHF
KNSPLKRPWKGIIQIAYDMFKEQKDLSDYMSEKTCSSCEGHRLKASSLSVEVAGLKMADF
LTKPIEEVYHFFNNPTHFNYLNEQEKKIAEPILKEILERVFFLYDVGLGYLTLGRDARTI
SGGESQRIRIASQIGSGLTGVLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTLIVVEHD
KETIKHADFVVDIGPKAGRHGGEVVFSGSVKDLLQNNHSTALYLNGTKKIERPKFEPPKE
KHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSGSGKSSLILQTLLPTAQTLLNHAKKIQ
SLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMDEIRILFAEQKESKILGYSTS
RFSFNVKGGRCEKCQGDGDIKIEMHFLPDVLVQCDSCKGAKYNPQTLEIKVKGKSIADVL
NMSVEEAYEFFAKFPKIAVKLKTLIDVGLGYITLGQNATTLSGGEAQRIKLAKELSKKDT
GKTLYILDEPTTGLHFEDVNHLLQVLHSLVALGNSMIVIEHNLDIIKNADYIIDMGPDGG
DKGGKIIASGTPLEVAKNCEKTQSYTGKFLALELK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcattattcagggggctagggagaataatctcaaaaatatttttttagaa
atccctaaaaaccaatttgttgtttttaccggattaagcggttcgggtaaatccactctg
gcgtttgacactttatacgctgaaggccaaaggcgctatttagagagtttgtccagctat
gcaaggcaatttttagacaaagtgggtaagcctaatgtggataaaattgaaggcctaacc
cctgcgattgctattgatcaaaaaaccacttctaaaaaccctagatccactgtggggacg
atcactgagatttatgattatttaaggttgttgtttgcaaggattggggagcaattttgc
cccacatgtttagagcccatcagttctatgagcgcgagcgatattatttctcaaatctgt
catttagaagaaaattctaaaatcattattctagcccccattattaaagataaaaaaggt
tcgtttaacgataaattagagagcttgcgtttaaaggggtatgtgagggcttttgttgat
ggggtgatggtgcgtttagatgaagaaatccatttgcacaaaaccaaaaaacacaccatt
gaagcggtggtggatagagtggttatcaatagcgaaaattcttcacggatcgctagcgca
gtagaaaaagcccttaaagaaagctatggggaattagaagtggaaatcttgcaagacaac
gcgccaagcatcaggaagcattacagcgagcataaggcatgctttaaatgcaagatgagt
tttgaagaattagagcctttgagtttttcattcaattcgcctaaaggggcgtgcgagagc
tgtttgggtttggggacaaaattcagcttagatattagtaagattttagatcctaacacg
cctttaaatcaaggagcgattaaagtgatttttgggtataaccgcagttattacgctcaa
atgtttgaaggtttttgcgaatacaatggcattgacaccgcgctttgttttaacgaattg
aataaagagcaacaggacgctcttttgtatgggaatggcactgaaatcagctttcatttc
aaaaacagccctttaaaacgcccttggaaaggcattatccaaatcgcttatgacatgttt
aaagagcagaaggatttgagcgattacatgagcgaaaaaacctgttcttcgtgcgagggg
catcgtttgaaagcctcaagtttgagcgttgaagtcgctggcttgaaaatggcggatttt
ttaactaagcccattgaagaggtctatcacttttttaataatcccacgcattttaactat
cttaacgagcaagaaaaaaagatcgctgaacccattttaaaagagattttagaaagggtg
ttttttttatacgatgtggggttagggtatttgactttagggagggatgcgcgaacgatt
agcggaggggagagccaaaggatacgaatcgctagtcaaatcgggagtggtttgacaggg
gttttgtatgttttagacgagcctagcattggtttgcatgaaaaagacacgctcaaactc
atcaacacccttaggaatttgcaaaaaaaggggaacacgctcattgtcgtagaacatgat
aaagaaacgattaagcatgcggattttgttgtggatattgggccaaaggctggaaggcat
gggggtgaagtggtttttagtgggagcgtaaaagatttattgcaaaacaaccattctacc
gccttgtatctcaacggcactaaaaagattgagcgtcctaaatttgaaccccctaaagaa
aagcattttttagaaattaaaaatgtcaatatcaataacatcaagaatttgagcgttcaa
atccctttaaaacaattagtgtgcattactggggtgagcgggagcggtaaaagttcgctg
attttacaaacccttttacccaccgctcaaacccttttaaaccatgctaaaaaaattcaa
agcttgaatggggtggagattgtagggttggagcatttggataaagtgatttatttagac
caagcccccataggcaaaaccccacgaagcaaccctgccacttatacaggagtgatggat
gaaatcaggattttattcgccgagcaaaaagaatctaaaattttaggctatagcacgagc
cgttttagctttaatgttaaaggggggcggtgcgagaaatgccaaggcgatggggatatt
aaaatagaaatgcatttcttgcctgatgtgttagtccaatgcgatagctgtaagggcgct
aaatacaaccctcaaactttagaaatcaaggtgaaaggcaaatccattgccgatgtgtta
aacatgagcgtggaagaagcttatgaattttttgctaaattccctaaaatcgctgtgaag
ttaaaaacccttatagatgtgggcttaggctatatcactttagggcaaaacgctacgact
ttaagtgggggggaggctcagaggatcaaattagctaaagaattgagcaaaaaagacaca
ggcaaaaccctttatattttagatgagcctaccaccggtttgcattttgaagacgtgaat
caccttttacaagtcttgcattctttagtagcgttaggcaattctatgatagtgattgag
cataatttagacattatcaaaaacgctgactacattatagacatggggcctgatgggggg
gataagggcgggaaaatcattgcgagcggcacgcctttagaggtggctaaaaattgcgaa
aaaacccaaagctatacgggaaaatttttagctttggaattgaaatag
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