Helicobacter pylori 52: HPKB_0054
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Entry
HPKB_0054 CDS
T01898
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPKB_0054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpz03400
]
HPKB_0054
Enzymes [BR:
hpz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPKB_0054
DNA repair and recombination proteins [BR:
hpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPKB_0054
Prokaryotic type
HPKB_0054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACX98687
LinkDB
All DBs
Position
55936..56607
Genome browser
AA seq
223 aa
AA seq
DB search
MAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPSAVKIILLGQD
PYHSTYLENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPCCGDLSAWAKR
GMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEANAPLIVVLLGKIAQKKIALIPK
NKHIVITAPHPSPLSRGFLGSGVFTSVQKAYREIYHKDFDFSL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttggcttggcgggagtttttgcaaagcgaatttaaaaagccttattttttagaaatagaa
aaacgctacttagaggctctaaaaagccctaagaccattttccctaaaagctctaatctg
ttttatgcgctcaatctaacaccccctagcgcggttaaaatcatccttttagggcaagac
ccctaccattccacctacctagaaaatcaacaagaattgcctgtggcgatgggcttaagc
tttagcgtggaaaaaaacgcccccatccctccaagcttaaaaaatatttttaaagaattg
catgcgaatttaggcgtgcctgtgccttgttgcggggatttgagcgcgtgggctaaaagg
ggcatgctgttgttgaacgccattttaagcgtggaaaaaaaccaagccgcttcgcataaa
cgcatcggctgggaagcttttagcgatcaaatattgatgcgcctttttgaagccaacgct
cccttgatcgtggtgctattaggaaagatcgcgcaaaaaaagatcgctctaatccccaaa
aacaagcacattgtcattaccgctcctcaccctagcccattatctagggggtttttaggg
agtggggtttttacaagcgttcaaaaagcttatagagagatttatcataaggattttgat
tttagtttatga
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