Helicobacter pylori 52: HPKB_0301
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Entry
HPKB_0301 CDS
T01898
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz00300
Lysine biosynthesis
hpz00470
D-Amino acid metabolism
hpz01100
Metabolic pathways
hpz01110
Biosynthesis of secondary metabolites
hpz01120
Microbial metabolism in diverse environments
hpz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPKB_0301
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPKB_0301
Enzymes [BR:
hpz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HPKB_0301
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ACX98911
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Position
312077..313294
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AA seq
405 aa
AA seq
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MFNYEELFQTHKTPFYLYDFGKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLASL
ESGADCVSIGEIHRALKAGIKPYRIVFSGVGKSESEIEQALKLNILFLNVESFMELTTIE
TIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPI
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQRILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPYKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDHQIRVIRKREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
ggcaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgctacgctttaaaggcgaattccaatttgagtatcctctctttattagctagttta
gagagcggagcagattgcgtttccataggtgagatacacagggctttaaaagccgggatc
aagccttataggatcgtgtttagcggggtgggtaagagcgaatctgaaatagaacaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattaacaacgattgaa
acaatcgctcaatctttagggataaaggccaggatttccattagaatcaaccctaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataaattcggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctatt
agcgtgcattttcatatcggttcacagctcttagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgaaaatgaagagactatcaagctttatgat
tacgcgcaaaggattctaaacgcgcttcaaggcttggatttgacgatcatttgtgagccg
ggccgatcgatcgtggctgagagtggggaattgatcacgcaagttttgtatgaaaaaaag
gctcaaaacaagcgctttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccttataaggggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggccagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcac
caaatcagggtgataagaaaaagagaggctttagaagatttatggcgcttagaagaagaa
ggcttaaaaggggtttga
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