Helicobacter pylori 52: HPKB_0490
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Entry
HPKB_0490 CDS
T01898
Symbol
waaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD)
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz00541
Biosynthesis of various nucleotide sugars
hpz01100
Metabolic pathways
hpz01250
Biosynthesis of nucleotide sugars
Module
hpz_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPKB_0490 (waaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpz01005
]
HPKB_0490 (waaD)
Enzymes [BR:
hpz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HPKB_0490 (waaD)
Lipopolysaccharide biosynthesis proteins [BR:
hpz01005
]
Core region
HPKB_0490 (waaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
FCSD_central
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ACX99093
LinkDB
All DBs
Position
505919..506911
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AA seq
330 aa
AA seq
DB search
MRYIDDELENQTILITGGAGFVGSNLAFYFQENHPKAKVVILDKFRSNTLFNNNRPSSLG
HFKNLIGFKGEMVIADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLDQELVMKTNYQAFL
NLLEIARQKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNI
QVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANV
KAMKAQKSGVYNVGYSQARSYNEIVSILKEHLVDFKVTYIKNPYAFFQNHTQAHIEPTIL
DLDYTPLYDLESGIKDYLPHIHAIFKEQRA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatattgatgatgaattagaaaatcaaacgattttaatcaccggtggggctggc
tttgtgggcagtaatctggccttttattttcaagagaaccaccctaaagctaaagtggtc
attttggataagtttcgcagtaacacgctttttaataataaccgccccagttctttaggg
cattttaagaatttaatcggttttaagggtgagatggttatagctgatattaataacccc
ttagatttaaggcgtttagaaaaattgcattttgattatttgttccaccaagccgctgtc
tctgatacgaccatgctggatcaagaattagtgatgaaaaccaattatcaggctttttta
aaccttttagaaatcgctcgccaaaaaaaggctaaagtgatttacgcttcttcagcgggc
gtttatggcaacaccaaagcccccaatgtggtaggcaaaaacgaaagccctgaaaatgtt
tatggcttttccaagctttgcatggacgaatttgtcctctctcattcaaatgacaatatt
caagtaggcttaaggtattttaatgtctatgggcctagggaattttataaagaaaaaacc
gcttctatggttttgcaactcgctttaggtgcaatggcgtttaaggaagtcaaacttttt
gaatttggcgagcaattaagggattttgtctatattgaagatgtgatccaagcgaatgtg
aaagcgatgaaggctcaaaaaagtggggtttataatgtgggttattcccaagccagaagt
tataatgaaatagttagcattttaaaagagcatttagtggattttaaagtaacttacatc
aaaaacccttacgctttcttccaaaatcacacccaagcgcatattgaacccactattttg
gatttagactacactcctttatacgatttagaaagtggcattaaagattatttgccccat
atccatgcgatttttaaagaacagcgtgcatga
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