KEGG   Helicobacter pylori 52: HPKB_0499
Entry
HPKB_0499         CDS       T01898                                 
Name
(GenBank) putative type I restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hpz  Helicobacter pylori 52
Brite
KEGG Orthology (KO) [BR:hpz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpz02048]
    HPKB_0499
Enzymes [BR:hpz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HPKB_0499
Prokaryotic defense system [BR:hpz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HPKB_0499
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD
Other DBs
NCBI-ProteinID: ACX99102
LinkDB
Position
516597..519593
AA seq 998 aa
MNYEIIAQSNESTVIAEYHSDNDKKSAYESEAELERAFIALLQKQGYEFKEIHKEQELKD
NLKEQLEKLNDHHFTPKEWEILYSQFIANKNDDYKAKTRKIQEDPIFNLTLENGKTKNIK
LIDKKNIHKNALQVIHQYSAKGGKYENRYDVSVLVNGLPLVHVELKRRGVAIREAFNQIK
RYKRDSFSAEDGLFDFVQIFVISNGTSSKYYSNTTRIAQLEKNHKADTFEFTNYWADSKN
NNIEDLMDFARSFFAKHSLLNVLTRYCVFTSDEVLLVMRPYQIVAAERILEKIKVAQNSK
TKNQSKGYIWHTTGSGKTLTSFKSAVLAKELESVSKVLFVVDRKDLDYQTMKEYDKFQKD
CANSNTSTKILKEQLEDSNAKIIITTIQKLDKFVKSHLKGHAIFNEEVVMIFDECHRSQL
GSMHQVITKAFKKYHLFGFTGTPIFAQNCDKNNPLGTTEQKFGECLHQYTIIDAIRDKNV
LPFRVEYHNTIKAKEGIIDNKVRAVDEKNALLDTRRIKEITKCILERFNQATKNKKFNSI
LACSSVEALKKYYLAFKEEKHDLKIATIFSYSANEEFDALEDENNESANGLDKSSRDFLE
GAIADYNGMFGVSFDTSDQKFQSYYKDLSQKVKDREIDLLMVVNMFLTGFDATRLNTLWV
DKNLKYHGLIQAFSRANRILDSVKTHGNIVCFRDLEQDLNDALMLFGNKEAQSIALLRKY
EDYLKGYVDNNKEYEGYEGLIKRLLSEFPLKEPIISESQKKDFIKLFGKILKLENILNSF
ENFKKDDYINPRDFQDYQSKYLDFYDEMRPEKGRDKEEINDDLIFEIELIKQVEVNIDYI
LNLIEEFAKEHGVEIQGVKTKIEPIINSSIELRNKKDLIMDFIDKYNKDQEVHAYFQDYI
HQKREEEFQKLIEENRLNEEKAYLFMQHAFKGGEISFSGTEFPKIIEEKPSRFDKNSRYQ
EVKEKVAASLSRFFHRFCDLTSSIFKKNGVKKDEINEK
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgaattatgagattatcgcacaaagcaatgaaagcaccgtgatagccgagtatcatagc
gataatgataagaaaagcgcttatgagagcgaagcagagctagaaagggcgtttatagcg
cttttacaaaaacaaggctatgaatttaaagaaatccacaaagaacaagaattaaaagac
aatttaaaagagcagttagaaaagcttaacgatcatcatttcacgcctaaggaatgggag
attctttattcccaattcatcgctaataaaaacgatgactataaggctaaaacgagaaaa
atccaagaagatccgatttttaatctcacgctagagaatgggaaaaccaaaaacattaaa
ctcattgataagaaaaatatccataaaaacgccttgcaagtgatccaccaatacagcgct
aaaggggggaaatatgagaaccgctatgatgtgagtgtccttgtgaatggcttgccttta
gtgcatgtggaattgaaaagaagaggcgtagcgattagagaggcgttcaatcaaatcaag
cgctataaaagggatagttttagcgctgaagacgggctttttgatttcgtgcagattttt
gttatcagtaacggcacgagtagtaaatattattcaaacaccacaagaatagcccagctg
gaaaaaaaccataaagccgatacttttgaattcacgaattactgggcggatagtaagaat
aacaatattgaagatttaatggattttgcccggtcgttttttgcaaagcatagccttttg
aatgttttaacgcgctattgcgttttcaccagcgatgaggttttattggtgatgcggcct
tatcaaatcgtggcagccgaaaggattttagaaaaaatcaaagttgcgcaaaatagtaaa
acgaaaaatcaaagcaaaggctatatctggcacacgacagggagcggtaaaaccttaacg
agctttaaaagtgcggttttggctaaagaattagagagcgtttcaaaagttttgtttgtg
gtggatagaaaggatttggactatcaaaccatgaaagaatacgataaattccaaaaagat
tgcgctaattccaacacaagcaccaagattttaaaagaacagcttgaagattctaacgct
aaaatcattatcaccacgatccaaaaattagacaaattcgttaaatcccaccttaaaggg
catgcaatctttaatgaagaagtggtgatgatttttgatgaatgccacaggagtcagcta
ggctccatgcaccaagttatcactaaagcgtttaaaaaataccacctttttggctttact
ggcacgcccatttttgcacaaaattgcgataaaaacaaccctttaggcacgacagagcag
aaatttggggaatgcctccaccaatacaccattattgatgcgattagggataaaaatgtt
ttgccctttagagtggaataccacaacaccattaaagctaaagagggcattatagataat
aaggttagagcggttgatgaaaaaaacgcccttttggatactaggaggatcaaagaaatt
actaaatgcattttagagcgtttcaatcaagccactaaaaataaaaaattcaattccatt
ctggcatgttctagtgtagaagcgctgaaaaaatactacctggcttttaaagaagaaaaa
cacgaccttaaaatcgctaccatttttagttatagcgctaatgaagaatttgatgcgtta
gaagatgaaaacaatgaaagcgctaacgggctagataaaagctcaagggattttttagag
ggcgcgattgcggattataatggaatgtttggcgtttcttttgacacttcggatcaaaaa
ttccaaagctattataaggatctttctcaaaaagtaaaggatcgtgaaatcgatctttta
atggtggtgaacatgtttttgaccgggtttgacgctacaaggctcaacaccctttgggtg
gataaaaacctaaaataccatgggctaattcaggctttttcacgcgcaaaccgcatttta
gatagcgttaaaacgcatgggaatatcgtgtgttttagggatttagagcaagatttaaat
gacgcgctcatgctttttggcaacaaggaagctcaatctattgcgctgttaagaaaatat
gaagattatttgaaaggctatgtggataataacaaagaatacgagggctatgagggtttg
attaaaaggcttttaagcgaatttcccttaaaagagccgattatttcagaaagccagaaa
aaggatttcattaagctttttggcaagattttgaaattagaaaatattttaaacagcttt
gaaaatttcaaaaaagacgattacatcaatccgagggattttcaagattatcaaagcaaa
taccttgatttttacgatgaaatgaggccagaaaaagggagggataaagaagagattaac
gacgatttgatttttgaaattgaactcattaagcaagtggaagtcaatattgactatatt
ttgaatttgattgaagagttcgctaaagagcatggggtggaaattcaaggcgttaaaacc
aaaatagagccgatcatcaactccagcatagagttaaggaataaaaaagatttgatcatg
gatttcattgacaaatacaacaaagaccaagaagtccatgcgtattttcaagattacatc
caccaaaaaagagaagaggaattccaaaaactcatagaagaaaaccgcttgaatgaagaa
aaagcctatttattcatgcagcatgcctttaaagggggcgaaattagcttcagcgggacg
gaatttcctaaaatcattgaagaaaaaccctccaggtttgacaaaaattcgcgctatcaa
gaggtgaaagaaaaagtcgctgcaagcctttctcgttttttccaccgcttttgtgatctc
actagttctatatttaagaaaaatggggttaaaaaagatgagattaatgaaaaatag

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