Helicobacter pylori 52: HPKB_0628
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Entry
HPKB_0628 CDS
T01898
Name
(GenBank) outer membrane protein SabA
KO
K15848
outer membrane protein SabA
Organism
hpz
Helicobacter pylori 52
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
SabA_adhesion
Spectrin_Anc-1_2
Sec20
Motif
Other DBs
NCBI-ProteinID:
ACX99222
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All DBs
Position
complement(643292..645265)
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AA seq
657 aa
AA seq
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MKKRFLLSLSLAASLLCAEDNGFFVSAGYQIGEAVQMVKNTGELKNLNDKYEQLNSSLAQ
VAALRQSIKNANNYELVKQSISNLISFANNNSQNKDLSPIYSSAQAVLTSILAFWTLYAG
NALTFNVEGLTTSTSQNGQGFSNVPLTAKCSQPSSKNCMPIATYQKMKNLAESLQKAQGT
LCALNENGCNTANQDQGATISSALNTAKELMDLISATNTNMDWSKIKINGLLVPSEVRGD
KNGSTTKYEGKITSNNSVTSYALFQNIYKMLPYLQESLKLSEQNKSKSDGLQGQVTGDNT
NPNYDKEIYNFAQNQQTILSNAKSIFNLFNSIPKDQFEYLQVGYLKIPPLGTTPTKPYRK
NVNLNAEIDSIQRNVSYYGNRIDSALSVARDVYNLKSNQKEIVAAYNGAKNLSQEISQLP
YNQVNTKDIVTLPYDKNAPAAGQYNYQINPEQASNLSQALAAMSNNPFKNIGMIASQNNN
GALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSSFFNSSSDIWTYGGGSDLLVN
FINDSVTRKNNKLSVGLFGGIQLAGTTWLNSQYVNLTALNNPYSAKVNTSNFQFLFNLGL
RTNLATAKKEDSEHSAQHGIELGIKIPTINTNYYSFLGAKLEYRRLYSVYLNYVFAY
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgatttttactttctctatcccttgcggcgtcattgctttgcgctgaagac
aacggcttttttgtgagcgcaggctatcaaatcggcgaagcggtgcaaatggtcaaaaac
accggtgaattgaaaaacttgaacgacaaatacgagcaattaaactcatctttagcccaa
gtggctgctttaaggcaaagtattaaaaatgcaaacaactacgagttggttaaacaatct
atatctaatttgataagctttgcgaataacaactctcaaaataaggatttatcgcccatt
tatagtagcgctcaagccgttctcacttccatactggctttctggactctttatgcaggg
aacgctctcacttttaatgtggaaggcttgaccactagcaccagtcagaatggtcaaggg
tttagcaatgtgcctttgacagccaaatgctcccaaccaagttctaaaaactgcatgcct
atagctacttatcagaagatgaaaaatcttgctgaaagcctccaaaaagctcaaggcact
ctttgcgctttaaatgaaaatgggtgcaatacagccaatcaagatcaaggtgcaaccata
tctagtgcgctcaataccgcaaaagagcttatggatttgattagtgcaaccaacactaac
atggattggagcaagataaaaatcaacgggcttttagtgccaagtgaggttagaggcgat
aagaatggttctacaaccaaatatgaaggtaagataacctccaataactccgtaacctct
tatgcgttgttccaaaacatttacaaaatgctcccttatttgcaagaatctctcaagctt
tctgaacaaaacaaaagcaaatcagatggcttgcaaggtcaagttacaggcgataacaca
aaccctaattacgacaaagaaatttataatttcgcacaaaaccaacagaccattctttct
aacgctaaaagcatctttaacctcttcaattctatccctaaagaccagtttgaatatttg
caagttggttatttgaaaatcccccctttaggcacgactcccactaagccttacagaaaa
aatgtgaatctaaacgctgaaattgattcgattcaaaggaatgtgagttattatggcaat
cggattgattcggctttaagcgtggctagagatgtttataacctaaaatccaatcaaaaa
gagattgtagccgcttataacggtgctaagaatttgagccaagagatttctcaactccca
tacaatcaagtcaatacaaaagacattgtcacactaccttatgataaaaacgctccagca
gcgggccaatacaactaccaaatcaacccagagcaagcatccaatctttctcaagcttta
gcggcgatgagcaataatccctttaaaaatataggaatgatagcctctcaaaacaataac
ggcgcattgaatgggcttggcgtgcaagtgggctataagcaattctttggcgaaagcaaa
agatggggattaaggtattatggcttttttgattacaaccacggctatatcaaatccagc
ttttttaattcttcttctgacatatggacttatggcggtgggagcgatttgttagtgaat
tttatcaacgatagcgttacaagaaagaacaacaagctttctgtgggtctctttggtggt
atccaactagcagggactacatggcttaattctcaatacgtgaatttaaccgcgttaaat
aatccttacagcgcgaaagtcaatacttccaatttccaattcttgttcaatctcggtttg
aggacgaatctcgctacagctaagaaagaagacagcgaacattccgcgcagcatggcatt
gaactaggcattaagatccctaccatcaacacgaattactattcttttctaggcgctaag
ctagaatacagaagactctatagcgtgtatctcaattatgtgtttgcttattaa
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