Helicobacter pylori 52: HPKB_0843
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Entry
HPKB_0843 CDS
T01898
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz00470
D-Amino acid metabolism
hpz00550
Peptidoglycan biosynthesis
hpz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPKB_0843 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPKB_0843 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpz01011
]
HPKB_0843 (murD)
Enzymes [BR:
hpz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HPKB_0843 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpz01011
]
Precursor biosynthesis
Amino acid ligase
HPKB_0843 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
ACX99435
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Position
complement(892266..893534)
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AA seq
422 aa
AA seq
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MKISLFGHGKTTLALGRFFRKNHNEVKFFDDQFTSSFKDREGFVCYPSKDFNPNDSQLEI
VSPGISFTHPLVIKAKHLVSEYDYINSLFDLVFTPTIISISGTNGKTTTTEMLTMLLEDF
KAVSGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVEADHLTWHCNFE
NYLNAKLKVLTLMPKTSLAILPLKFKEHSSVQNSQAQKIFFDKSEEVLERLKIPSNALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKKLNAFKIGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNYEVSLYAIGSSASIIQ
ALALEFNVSCRVCLELEKAVQEIKSVLSQNEIALLSPSAASLDQFSSYKERGERFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctttatttgggcatggcaaaaccactctagccttagggcgtttttttaga
aaaaaccataacgaagtcaaattttttgacgaccaattcacttcatcttttaaagataga
gagggttttgtttgctatcccagtaaggatttcaaccctaatgattcccaactagagata
gtcagccctggcattagtttcacgcaccctttagtcataaaagccaagcatttagtgagc
gaatacgattatattaatagcttgtttgatttggttttcacgcctactataatcagtatt
agcggcactaacgggaaaaccaccacgaccgaaatgctcaccatgcttttagaagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaaacaatcg
cccttgtgggtgttagaaacaagctccttttctttgcactacactaataaggcttaccct
ttaatctacttgctcatcaatgtggaagctgatcatttgacttggcattgcaattttgaa
aattatttgaacgctaaactcaaggttttaacattgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacattcaagcgttcaaaattcgcaagcgcaaaaaatcttt
tttgacaaaagcgaagaggttttagagcgtttaaaaatcccttctaacgctctttttttt
aagggagcgtttttattagacgctgccttagcccttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagattatagagaaaacgccctgaaaaaactgaacgctttt
aaaatcggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaatattgatgccaccttgcaagccttaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gaatttaaaaactatgaagtaagcctttatgcgataggatcaagtgcttctattatccaa
gccttagcgttagaatttaatgtttcttgtcgggtttgtttggagttagaaaaagcggtt
caagaaattaaaagcgttttatcgcaaaatgaaatcgctttgctttcacccagtgcggcc
agtttggatcaattttcttcgtataaagaaaggggtgaaagatttaaagcgtttgtttta
aaggattaa
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