Helicobacter pylori 52: HPKB_1279
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Entry
HPKB_1279 CDS
T01898
Symbol
gmd
Name
(GenBank) GDP-D-mannose dehydratase (rfbD)
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz00051
Fructose and mannose metabolism
hpz00541
Biosynthesis of various nucleotide sugars
hpz01100
Metabolic pathways
hpz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
HPKB_1279 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPKB_1279 (gmd)
Enzymes [BR:
hpz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
HPKB_1279 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
TPR_3
Motif
Other DBs
NCBI-ProteinID:
ACX99826
LinkDB
All DBs
Position
complement(1330304..1331449)
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AA seq
381 aa
AA seq
DB search
MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSEHKRRF
FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR
ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF
AVNGILFNHESKVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH
LMLQAPIPQDYVIATGKTTSVRDFVKMSFEFIGIGLEFQNTGIKEIGLIKSVDEKRANAL
KLNLSHLKKGQIVVRIDERYFRPTEVDLLLGDPTKAEKELGWVREYDLKELVKDMLEHDL
KECQKNLYLQDGGYILRNFYE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaaaatcgctttaatcaccggggttaccgggcaagacgggagctatctggct
gaatacttgctgaatttgggttatgaagtgcatgggttaaaaaggcgctcttctagcatc
aacacttctaggatcgatcatctgtatgaagatttgcacagcgagcacaaaaggcgtttt
ttcttgcactatggggatatgaccgatagctctaatcttatccatttaatcgctaccact
aagcctacagagatttataatttagccgctcaaagccatgtgaaagtctcttttgaaacc
ccagaatacaccgctaacgctgatggtattggcacgctaaggattttagaagccatgcgg
attttaggcttagaaaagaaaacacgattttatcaagccagcacgagcgaattgtatggc
gaagttttagaaaccccacaaaatgaaaacaccccctttaacccacgaagcccctatgcg
gtcgctaaaatgtatgccttttacatcaccaaaaattacagagaggcttataacttgttt
gcggttaatggcattctttttaaccatgaaagtaaagtaaggggcgaaacttttgtaact
cgtaaaatcacacgagccgctagcgcgatagcgtataacttaacagattgcttgtattta
gggaatttagacgctaaaagagactgggggcatgccaaagattatgtgaaaatgatgcat
ttaatgctccaagcgcccattccacaagactatgtgatcgctacaggcaagaccacaagc
gtgcgcgattttgtgaaaatgagctttgaatttatcggtattggtttagaatttcaaaat
acagggattaaagaaatcggtttgattaaaagcgttgatgaaaaaagagcgaacgcttta
aaattaaacttaagccatttaaaaaaaggccaaatcgtggtgcgcatagacgagcgctat
ttcaggcctactgaagtggatttgcttttaggcgatcctactaaggcagaaaaagagcta
ggctgggtcagggaatacgatttaaaagagttggttaaggacatgttagaacatgactta
aaagaatgccagaaaaacctttacttgcaagatgggggctatattttaaggaatttttat
gaatga
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