Helicobacter pylori 52: HPKB_1382
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Entry
HPKB_1382 CDS
T01898
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz03420
Nucleotide excision repair
hpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPKB_1382
03430 Mismatch repair
HPKB_1382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpz03400
]
HPKB_1382
Enzymes [BR:
hpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPKB_1382
DNA repair and recombination proteins [BR:
hpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPKB_1382
MMR (mismatch excision repair)
Other MMR factors
HPKB_1382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ACX99919
LinkDB
All DBs
Position
complement(1428180..1430225)
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILDNLNEAQKIAASHIQGPLLILAGAGSGKTKTLTSRLVYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE
TKTLCKQLKISSFRASISQIKNGMMDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNETIAKETSERYHYIMVDEYQDTNALQLELLKKLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRHKKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALAFMHLAAKKDDRFFIKRVLNKPSRGLGKITQELIFSLLDGENLN
LEEALKLGVFKGKLNPKNEYALKQFIAMIGRLREAFEISVEEFCTRFLEETNLLKSYEKE
DNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESVLDTHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVQERSYFGRKIS
CSPSVFLEEAELLKQDNPPKQDFKKDAPIKVGDLIRHKLFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISVKFVEKVDDGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttagacaatttaaacgaagcgcaaaaaatcgccgcaagc
cacattcaagggcctttattgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagtgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagcaaagaaatgcaagaaagggctttgaaattgttgaaa
aaccaaacccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgagccttttaaaaagagcgtgcgatttttcggtgttagacagcgatgag
acaaaaacgctgtgcaaacagctcaaaatttcaagctttagagccagtatttctcaaatc
aaaaacggcatgatggatttaagcatgcaagatagcgaatgttataaagcgtatgagctt
tatcaaaacgcgctcaaaaaagacaatttagtggattttgacgatttgctttttttaagc
cttaagattttacaagataatgaaactatcgccaaagaaactagcgaacgctaccattac
attatggtagatgagtatcaagacacgaacgccttgcaattagaacttttaaaaaaattg
agtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaggtg
gtgaaattagaaaccaactaccgctccagcgctgaaattttagcgtgcgctaactccctt
attagccataaccaacaccgccacaaaaaaacgcttcaaagttttaagggatcgcataaa
agcgtggtttgtaaagaatatttgacgcaaaaagaagagagcttggatgtggcttatcaa
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtatcgctta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccctataggctt
attggagcggtgagtttctatgaaagagcagaggttaaagacgctttggcgttcatgcat
ttagcggctaaaaaagacgatcgcttttttattaagcgcgttttaaacaagccttcaaga
ggccttggcaaaatcactcaagagttgattttttctcttttagatggtgagaatttgaat
ttagaagaagccctaaaacttggggtgtttaaaggcaaattaaaccctaaaaacgaatac
gctttgaaacaatttatcgctatgatagggcgtttgagggaggcttttgaaatttcagta
gaggagttttgcactcggtttttagaagaaaccaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgttaaagagcttttaagtttagtgaaagagcat
tttaaaactaaccccacgcattctttattggattttttgaatgaaagtgttctagatacc
cataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaagggatta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcatagggggttc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagggct
aaagaagaattacagctctcttatgttcaagagcgttcgtattttgggaggaaaatttct
tgctcgccttctgtgtttttagaagaggctgagttactcaagcaagacaacccccctaaa
caagatttcaaaaaagatgcgcccattaaagtgggggacttgatcaggcataaacttttt
ggcaccggtagggttttaggcgtagaaaaaggtttgagcggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagtaaaatttgtagaaaaagtggatgatggg
ttttga
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