Helicobacter pylori 52: HPKB_1452
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Entry
HPKB_1452 CDS
T01898
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz03030
DNA replication
hpz03430
Mismatch repair
hpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPKB_1452
03430 Mismatch repair
HPKB_1452
03440 Homologous recombination
HPKB_1452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpz03032
]
HPKB_1452
03400 DNA repair and recombination proteins [BR:
hpz03400
]
HPKB_1452
Enzymes [BR:
hpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPKB_1452
DNA replication proteins [BR:
hpz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPKB_1452
DNA repair and recombination proteins [BR:
hpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPKB_1452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACX99987
LinkDB
All DBs
Position
complement(1513932..1514903)
Genome browser
AA seq
323 aa
AA seq
DB search
MIKMSLSSNKRAWMWWFQGAIFLNLKIVSWLLKAYRMSDSLLHKDIQALIARLKHQDLSL
GMLEKSLSRLIYDEINLEYLKACGLNFVETSENLITLKNLKTPLKDEVFSFIDLETTGSC
PLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYITELTGIAYEDTLNAPSVHEALQEL
RLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNLKLCTLDLSKRAILSMRYSLSFLKE
LLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPRARHQ
ETLAPFPLFERTKGLFNIIKATS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatgtctttgagctccaacaagcgggcgtggatgtggtggtttcagggagct
atatttttaaatctaaagatcgtaagctggctattgaaggcttacagaatgtcagacagc
ctcttgcataaagacattcaagccctaatcgctcgcttaaagcaccaggatttaagcttg
ggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaatttggaatattta
aaagcgtgtgggcttaatttcgtagaaacgagcgagaatttaatcacgctcaaaaacctt
aaaactccccttaaagatgaggttttttcctttattgatttagaaaccaccggctcttgc
cccctaaaacatgagattttagaaatcggagccgtgcaagtgaaggggggggaaatcatc
aatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattatattactgagcttaca
ggcatcgcttatgaagacaccctaaacgctccaagcgtgcatgaagctttgcaagaatta
cggctttttttaggcaatagcgtgtttgtagcccataacgctaattttgattacaacttt
ttagggcgttattttgtggaaaaattgcattgccccttattgaatttaaagctttgcact
ttggatttatccaaacgagccattttgtccatgcgttattctttgagctttttaaaagag
cttttagggtttggtatagaagtcagtcatagagcctatgcggacgctttagcgagctat
aagctctttgaaatatgcttattaaacttgcccagttacatcaaaacgacaatggatttg
attgatttttccaaatgcgctaacaccttgatcaaaagacccccaagagccagacaccaa
gagactctagcgccatttcctctttttgagagaacaaagggtttgttcaatatcataaaa
gcgaccagttaa
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