Helicobacter pylori 52: HPKB_1461
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Entry
HPKB_1461 CDS
T01898
Name
(GenBank) ATP-dependent nuclease
Organism
hpz
Helicobacter pylori 52
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Cas_Cas4
DEAD
AAA_30
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ACX99996
LinkDB
All DBs
Position
1520811..1523660
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AA seq
949 aa
AA seq
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MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYL
KILQKENLENEKEKEKSQNILKELEEKYRLDPSFVQNSAQKIYQRFLNAEIRISTIDAFF
QSILRKFCWFVGLSANFEVNEDTKAHQQQLNESFLSALNNKQLEELSVFIAQCLSYDSYT
SDSVLERLRFLKNKLYLFDPNKKDLAFDEEGFLEKLRNLNKQIQSVETASDTAKKAIKCD
DFRGFLNSSLTWLKKKGEYRDFKKIKDEIPTLESECEEIENDLKRYYEARESALFKKFPK
FIQLYDKATSKIQALDFDAIKDKVHALLNGYEEMPAEFFYFRLDSRIVHILIDEFQDTSL
NDYKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYGFRGSFSSLFESVSKDFYHDNLP
FNHRSSPLIINYVNTIFKKAYQNSPTAYLEQKYPKASSNKHAKDGYVKVSLVADERELLL
KQILQEAKNLLEHRIEPKDITLLCATNDDALEIKNYLQENLSAIRPSTESSAKLSQFVES
KIIKNALEYALAEEPYKPFYKHSVLKLAGYLHDDAIALVGFNPKKESVAGFVWKVMEWFE
LYGECAQICLELAVGCEDANEFLEKLEAKEIASFKAEGTQIMTIHKSKGMQFPYVIVCER
LGKPKSNNSNQFLEEYSGTELTRLYYRMKNREVVDKDYARALDKEEAAKDHEETNVYYVA
FTRAELGLIVVAKDKNQKKDKKESKNKGMREKLDLAPLEEGEIAPVISSQEEPLSASVVI
KPHAYGEQVQEIEEEPSDYEKNNDQEAINFGIALHKGLEYQYAYRIPKKSVLEYLNYHHG
FYGLDYQALEESLELFENDAKIQALFKNLALRGEVAFLFEGVVSRIDVLLWDKGQNLYVL
DYKSSQNYQQSHKVQVSHYTAFLQTQAPHFKIQAGIIYAHKRLLEKLWV
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggataccaaaagacaatgcatggctttaaaggcttcagcaggaagcgggaaaactttc
gctttgagcgtgcggtttttagccctattgtttaagggggctaatcctagcgagattttg
acgctcactttcactaaaaaagccaccgccgaaatgaaagagcgcattttagactattta
aaaattttgcaaaaagaaaaccttgagaatgaaaaagaaaaagaaaaatcccaaaatatc
ctaaaagaattagaagaaaaataccgcttagaccctagcttcgtgcaaaatagcgctcaa
aaaatctaccaacgctttttaaacgccgaaattagaatcagcaccattgatgcgtttttc
caaagcattttaaggaaattttgctggtttgtggggttgagcgcgaattttgaagtcaat
gaagacacaaaagcgcaccaacaacagctcaatgagagttttttgagcgctttaaataat
aaacagcttgaggaattgagcgtttttatcgctcaatgcttaagctatgatagttacaca
agcgattctgttttagagcggctgcgttttttaaaaaacaagctctatttatttgatccc
aataagaaagatcttgcatttgatgaagagggttttttagaaaaactaagaaacttaaac
aaacaaattcaaagcgtagaaacagcgtcagatacggctaaaaaagccattaaatgcgat
gattttagggggtttttaaacagctctttaacctggcttaaaaaaaagggtgaataccgc
gatttcaaaaaaatcaaagatgaaatccctactttagaaagcgaatgcgaagagattgaa
aacgatctaaaacgctattatgaagccagagaaagtgcattgtttaaaaaattccctaaa
ttcatccagctttatgataaagccacttctaaaatccaagccctggattttgatgcgatt
aaagataaagtccatgccttattgaatggttatgaagaaatgccagcggagtttttttat
ttcagattggacagcaggatcgtgcacattttgattgatgaatttcaagacactagcttg
aacgattataagattttagccccttttattgatgagattaaggccgggatagggcaagct
aaatggcacaggagcgtgttttttgtgggcgatgtcaagcagagcatttatggctttagg
gggagttttagctccttgtttgaaagcgtttctaaggatttttaccacgataatttacca
ttcaaccaccgcagttcgcctttgatcattaattatgtgaataccatttttaaaaaggct
tatcaaaattcccccaccgcttatttggagcaaaaataccctaaagcttccagcaataaa
catgctaaagacggctatgttaaagtctctttagtggctgatgaaagagaattgttatta
aaacaaatcttacaagaagctaaaaaccttttagagcatcgcattgagcctaaagacatt
acccttttatgcgccactaatgacgacgctttagaaatcaaaaattatttgcaagagaat
ttgagtgcgattcgcccaagcacggaatctagcgctaaattgtctcaatttgtggaatct
aaaatcattaagaacgctttagaatacgctctagctgaagaaccttacaagcccttttac
aagcacagcgttttaaaactcgctggatacttgcatgatgatgccatcgctttagttggt
tttaaccctaaaaaagagagtgtggcaggctttgtgtggaaggtgatggaatggtttgag
ctttatggagagtgcgcgcaaatctgcttggagttggcggttgggtgcgaagacgcgaat
gaatttttagaaaaattagaggctaaagagatcgcttctttcaaagcagagggcacacag
attatgaccattcataaatctaaaggcatgcaattcccttatgtgatcgtgtgcgaacgc
ttgggcaagcctaaatcaaataactccaatcaatttcttgaagaatatagcggcacagag
cttacgcgcctttattacagaatgaaaaatcgtgaggtggtggataaagattacgctagg
gctttagataaagaagaagcggctaaagatcatgaagaaaccaatgtgtattatgtcgca
ttcactagggctgagttagggctgattgtcgtggctaaagacaaaaaccaaaaaaaagac
aaaaaagaaagcaaaaacaaaggaatgcgcgaaaaattggatcttgcgcctttagaagag
ggagaaatcgcgccggttatttcttctcaagaagagcctttaagcgcgagcgttgtgatc
aaaccccatgcttatggcgagcaagtccaagagatagaagaagagcctagcgattatgaa
aagaataacgaccaagaagcgatcaattttggtatcgccttgcacaagggattagaatac
caatacgcttatcgcattcctaaaaaaagcgttttagaatatttaaactaccatcatggt
ttttatggtttggattaccaagcgttagaagaaagtttagagctttttgaaaacgatgcc
aagatacaagctctttttaaaaatttggctttaaggggtgaagtggcttttttatttgaa
ggggttgtgtctaggattgatgttttattgtgggataaggggcaaaatttgtatgtttta
gattataaaagctctcaaaattaccagcaaagccataaggtgcaagtttctcattacact
gcgtttttacaaactcaagccccccattttaagatacaagcgggcattatttacgctcat
aaaagactgcttgaaaaattatgggtttga
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