Halomonas qaidamensis: K1Y77_01035
Help
Entry
K1Y77_01035 CDS
T08648
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hqd
Halomonas qaidamensis
Pathway
hqd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hqd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K1Y77_01035 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hqd03021
]
K1Y77_01035 (rpoA)
03400 DNA repair and recombination proteins [BR:
hqd03400
]
K1Y77_01035 (rpoA)
Enzymes [BR:
hqd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K1Y77_01035 (rpoA)
Transcription machinery [BR:
hqd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K1Y77_01035 (rpoA)
DNA repair and recombination proteins [BR:
hqd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K1Y77_01035 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
UYV19306
UniProt:
A0ABY6JPT4
LinkDB
All DBs
Position
213501..214496
Genome browser
AA seq
331 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGAAVVEAE
IAGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLSLNKQGPAVVTAGDIALDHS
VEIVNPDHVIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttcttcgccctcgcgacatcaaggtcgaagaaatcagc
gcacatcatgccaaaatcgttctcgaaccgttcgagcgcggctttggtcacaccctgggg
aatgcacttcgtcgcattctgctttcgtctatgcccggcgctgccgtggtagaggctgaa
attgccggtgtagagcacgaatacagtgcactcgaaggggtgcaggaagatgtcatcgaa
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgacgaggcggtgctc
tcgctgaacaagcagggcccagctgtcgtcaccgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggatcacgtcattgctcatgtcaatgaaggtgccgagctgaaa
attcagcttaaggtagcgctgggtcgtggttacgaaccggctgacgctcgtggctctgat
gaggagacacgtgcaattggccgcctgcagctggatgccaccttcagccctgttcggcgt
gtttcctattcggttgaagccgctcgtgttgagcagcgtaccgacctcgataagctaatt
atcgatctggaaaccgacggtacactggatccggaagaggctatccgtcgcagtgcgacc
attctgcaagagcagctggccgccttcgtcgacctggaagctgataaagaacaggaagtc
gaagaggaagaggatcttgttgatcctatcctattgcgccccgtagacgatcttgagttg
acagttcgcagcgctaactgcctaaaagccgagaatatttattatattggtgatctgatc
cagcgcactgaggttgagctgctgaagacacctaatcttggtaaaaagtctttgaatgaa
atcaaagatgtactggcagcgcgcggcttgtccctcggtatgcggctggaaaattggcca
cccgctagcctgaaggacgacaaggcctccgcgtga
DBGET
integrated database retrieval system
