Halomonas qaidamensis: K1Y77_02265
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Entry
K1Y77_02265 CDS
T08648
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hqd
Halomonas qaidamensis
Brite
KEGG Orthology (KO) [BR:
hqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hqd03021
]
K1Y77_02265 (rpoH)
Transcription machinery [BR:
hqd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K1Y77_02265 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
SWC7
Motif
Other DBs
NCBI-ProteinID:
UYV19525
LinkDB
All DBs
Position
469573..470439
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AA seq
288 aa
AA seq
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MSTSLLPVGQLSPGHDLGGYIKAVNGIPVLSIDEERELAFRLHDEGDLEAARRLVLSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRSAKKRLAWLNNDEVNAIAKDLDVKPEIVRDMEGRLSAYD
AGFDASPSDDEESTYQAPAYFLDDASADPATLLEDSNFEEDSTRRLQLALKGLDERSRDI
LQRRWLTDNKATLHDLADVYGVSAERIRQLEKNAMKKLRQKMGDAIAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtcttctaccggtgggtcagctctctccaggtcacgatctgggtggctac
atcaaggcggttaacggaattcccgtactaagcattgatgaagagcgtgagcttgcattc
cgcctccacgatgaaggtgatctggaagctgcgcgtcgtctggtgctttcgcacctgcgt
tttgttgtgcatattgctcgtagttattcaggttacggtttgccacaggctgacttgatt
caagaaggtaacgttggtctgatgaaagccgttaagcgcttcgaccccaatcaaggggtt
cgcttggtgtcttttgccgtgcattggatcaaagcggaaattcacgagtttgtgcttcgc
aactggcgaatcgtcaaaattgccactaccaaagcgcagcgcaagttgttttttaatctg
cgtagcgccaaaaaacgcttagcctggctgaataatgatgaggtcaatgcgattgcaaaa
gatctcgatgtgaagccagaaatagtgcgcgatatggaaggacgtttgtcggcttacgat
gcgggctttgatgcctctcctagcgacgacgaagagagcacctatcaagcaccggcgtac
tttttagatgatgcttcagccgatccggcaacgctgttagaagacagcaactttgaagag
gattcaacgcgtcgcttgcagctagctttgaaggggcttgatgagcgttcgcgggatatt
ttgcagcgtcgctggctgaccgataataaagcgacactgcacgacttagctgatgtgtat
ggcgttagcgctgaacgcattcgtcagctcgaaaagaacgctatgaaaaagttgcgtcag
aaaatgggcgacgctatcgccgcttaa
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