Halomonas qaidamensis: K1Y77_05800
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Entry
K1Y77_05800 CDS
T08648
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hqd
Halomonas qaidamensis
Brite
KEGG Orthology (KO) [BR:
hqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hqd03032
]
K1Y77_05800
03036 Chromosome and associated proteins [BR:
hqd03036
]
K1Y77_05800
03400 DNA repair and recombination proteins [BR:
hqd03400
]
K1Y77_05800
DNA replication proteins [BR:
hqd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K1Y77_05800
Chromosome and associated proteins [BR:
hqd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K1Y77_05800
DNA repair and recombination proteins [BR:
hqd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K1Y77_05800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UYV20171
UniProt:
A0ABY6JT46
LinkDB
All DBs
Position
complement(1243238..1243534)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELSAKEVETAVRIILDDMTDALASGGRVEIRGFGSFSLHYREPRT
GRNPKTGDPVDLDGKYVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaattaatcgaacaaattgcgatgcgtcaaccggagctatccgccaaa
gaagtggaaacggcggtgcgtattattttagacgacatgaccgatgcgcttgcaagtgga
gggcgtgttgaaatccgagggttcggcagcttttcattacactaccgagagccgcgtact
gggcgcaacccaaaaacgggagacccagtcgacttggatggtaagtacgtgccgcacttt
aaacctggcaaggagcttcgtgagcaggtagatgctagccgagcactaggctattag
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