Halomonas qaidamensis: K1Y77_07050
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Entry
K1Y77_07050 CDS
T08648
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hqd
Halomonas qaidamensis
Brite
KEGG Orthology (KO) [BR:
hqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hqd03032
]
K1Y77_07050 (topA)
03400 DNA repair and recombination proteins [BR:
hqd03400
]
K1Y77_07050 (topA)
Enzymes [BR:
hqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K1Y77_07050 (topA)
DNA replication proteins [BR:
hqd03032
]
Prokaryotic type
DNA Topoisomerases
K1Y77_07050 (topA)
DNA repair and recombination proteins [BR:
hqd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K1Y77_07050 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UYV20398
LinkDB
All DBs
Position
1520199..1522826
Genome browser
AA seq
875 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSVGHIRDLPTSGSGKTASDPKERARQAAATR
KMSAEEKAEYKKRKAHDQLIRRMGIDPDNGWEARYEVLPGKEKVVAELKKLAEKADAVYL
ATDLDREGEAIAWHLRETIGGDDSRYKRVVFNEITKNAIQDAFKSPGALNIPRVEAQQAR
RFLDRVVGFMLSPLLWAKIARGLSAGRVQSVAVRLIVEREREIRAFIPEEFWDVHADLAS
PDGELVRFALVRQDGKPFRPTSEKDTLTRIEQLRKAKLAITSREDKPTSSKPTAPFITST
LQQAASGRLGFSVKKTMTMAQRLYEAGYITYMRTDSTNLSKDAVESVRSFIDEEYGARYL
PESANRYSSKESAQEAHEAIRPSSVERKATDLSGMERDAERLYELIWRQFVACQMTPAQY
LSSTLSVEVDGYDLRAKGRVLKFDGYTRVMKPSGKNEDQSLPDLPKGTAMSLEKLDPQQH
FTKPAPRYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVKLESRRFYAEKLGDIVTER
LKESFPDLMDYSFTARMEDSLDEVAEGERNWQALLDAFYSEFSQELSKAESDEGMRPNQP
VPTDIDCPSCGRKMQIRTASTGVFLGCSGYNLPPKERCKTTIDLIPGEEAVAEDAGEEAE
TNALRAKRRCQKCGTAMDNYLIDEGRKLHICGNSPDCDGYEVETGKFKIKGYDGPIIECD
KCGSEMQLKSGRFGKYFGCTNSDCKNTRKLLRSGDVAPPKMDPIPMPELACQKVEDHYVL
RDGASGLFLAASKFPKNRETRPPLVKELQAHADELPEKYHFILKAPSEDPDGRPAQIRYS
RKNKEQFVMTDEEGKATGWKATFEAGKWHVEDKRK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcactggtcatcgtcgagtcgcctgcgaaagcgaagacgatcaataagtat
ctcggcaacgatttcatcgtaaagtcgagcgtgggtcacatccgtgacctgccgaccagc
ggctcaggtaagacagcctccgatccgaaggagcgcgctcgccaggctgcggcaacacgt
aagatgtcggcggaagagaaagcagagtacaaaaagcgtaaagcccatgatcagctaatt
aggcggatggggattgatccggataatggctgggaagcacgctacgaagtgctcccaggt
aaagaaaaggttgtcgcggaattaaagaagctggctgaaaaagcggatgctgtttatctc
gcgacggatttggatcgcgaaggggaggcaattgcttggcatttacgcgagacgattggt
ggtgatgacagtcgctataagcgcgttgtatttaatgaaataaccaaaaatgccattcag
gatgcgtttaagtcgccaggggcgttaaatattccccgcgtggaagcgcaacaagcgcgc
cgctttttggaccgcgtggttggttttatgctttctcctttgctgtgggccaaaattgcc
agaggcttatcagcaggtcgtgttcaatctgttgccgttcgtttaatcgttgagcgtgaa
cgagaaattcgtgcgtttattcctgaagagttttgggatgtccacgccgatcttgcgtcc
ccggatggggagttagtcaggtttgcgctggtgcgtcaggatggtaagcccttccgtcct
acctccgaaaaagacacgcttacacgcattgagcaactgcgtaaagccaagcttgcgatt
acctcccgtgaagacaaaccgacgagctccaagcctaccgcgccgtttattacctcaacg
ttgcagcaggctgctagcggccgattagggttctcggttaagaaaaccatgaccatggcc
cagcgcctctacgaagctggctacattacctacatgcgtaccgactccactaatctttca
aaggatgcggttgagagtgttcgctcatttattgatgaagagtacggtgcacgctattta
cctgagtctgctaaccgttacagcagtaaagaaagcgcccaagaagcccatgaagcgatt
cgcccttctagcgttgaacggaaagcgactgatctctcaggtatggagcgcgatgctgag
cgcctgtatgagttaatttggcgtcaatttgtcgcttgtcagatgacgccagcgcagtat
ctttccagtacgttgagcgttgaggttgacggttacgatttgcgtgccaaagggcgagtg
ctcaagtttgatggttacacgcgggtgatgaagccatcaggtaaaaatgaagatcaaagc
ctgcctgatttgccgaaaggcacggcaatgtcgcttgaaaagcttgacccgcagcagcac
tttacaaagcctgccccgcgctatacagaagccagcttagtaaaagagctcgaaaagcag
ggtattggccgtccttctacttatgcttctattatttccacgattcaggatcgtggctac
gtaaaattagagagtcgccgtttttatgctgaaaaactgggtgatattgtcaccgaacgg
ttgaaagagtctttcccggatttgatggattactcgtttacggctcgaatggaagatagt
ctggatgaagttgcggaaggtgagcgcaactggcaagccctgttggatgctttctatagt
gaatttagccaagagctcagcaaggcggaaagtgatgaggggatgcggcctaatcagccg
gtccctacggatattgactgtccaagctgtggccgaaaaatgcaaattcgtacggcctct
accggtgtctttttaggttgcagtggttataacctgccgcctaaagagcgctgcaaaacc
accattgatttaatccctggtgaagaggccgttgcagaagatgcgggtgaagaagcagaa
accaacgcgcttcgtgccaagcgtcgttgtcagaagtgcggtacggccatggataactat
ctgattgatgaaggtcgcaagctgcatatttgcggcaatagccctgattgtgatggttat
gaggtagaaacaggtaagtttaaaatcaaaggctatgatggccccattatcgaatgcgat
aaatgtggttccgagatgcagcttaaatcgggtcgatttggtaaatacttcggctgcacc
aacagtgactgcaagaacacacgtaaattactgcgtagcggcgatgtggcaccacccaag
atggatccgataccaatgccggaactagcttgccaaaaagtggaagatcattatgtgttg
cgtgatggtgccagcggtttattcctagcggccagcaagtttcctaaaaatcgtgaaact
cgaccgccgctggtgaaagagctgcaagctcacgccgatgagctaccagaaaagtaccac
tttatcctaaaggcacccagcgaagacccggatggcaggcctgcacaaattcgttattca
cgcaaaaataaagagcagttcgtgatgaccgatgaagagggtaaggcaaccggctggaaa
gcgacctttgaggcaggtaaatggcatgtggaggataagcgtaagtga
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