KEGG   Halomonas qaidamensis: K1Y77_08015
Entry
K1Y77_08015       CDS       T08648                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hqd  Halomonas qaidamensis
Pathway
hqd03030  DNA replication
hqd03430  Mismatch repair
hqd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hqd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K1Y77_08015
   03430 Mismatch repair
    K1Y77_08015
   03440 Homologous recombination
    K1Y77_08015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hqd03032]
    K1Y77_08015
   03400 DNA repair and recombination proteins [BR:hqd03400]
    K1Y77_08015
Enzymes [BR:hqd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K1Y77_08015
DNA replication proteins [BR:hqd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     K1Y77_08015
DNA repair and recombination proteins [BR:hqd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     K1Y77_08015
SSDB
Motif
Pfam: RNase_T UvrC_M Cho_C GIY-YIG_UvrC GIY-YIG Rv2179c-like RNase_H_2 DNA_pol_A_exo1 SprT-like
Other DBs
NCBI-ProteinID: UYV20580
UniProt: A0ABY6JVA9
LinkDB
Position
complement(1729619..1731004)
AA seq 461 aa
MRNMPLIFIDIETTGTRATRDRITEIAAFKVVNGHITDRWVSLINPGTSVPSHICQLTGI
YDDMLIDAPSFYTIAPSLREWLGEDCLVAHNARFDASFLRNEFKRVGINYQPQLRCTLRI
SRRLMPELPKHNLRSLLAHFNIHQARQHRAEDDATALWQLWKVWQQQFDAASWQAALADE
QRHRSLPAHLASEQLTGLPASPGVYLFYGHNRLPLYVGKSINLRSRVLGHFQRDHQDDKE
MRLVQQIQHIEWEETPGDLSAQLREAELVKELMPIMNRQLRRQGHLKTWYWPTDQPCPTL
VSGKAISQPQSGKLFGLFRSAKEAKAALRSIAETHQLCPQVLGIDKGTGRCFANQLGKCR
GACCGQEPLESHSQRAQEALASFQVNTWPWPGRIIIREKSRKNGPTSHHVIDHWCYLGSA
TTKQRALGLKGVAAKFDVDTYRILNRFLREPERHNLTISPL
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgagaaatatgccgctgatttttattgatatcgagacaacaggcactcgtgcgacgagg
gatcgaataaccgaaattgcggccttcaaggtagtgaacggtcacataacggatcgctgg
gtcagcctgattaatcctggcactagcgtgccctctcacatctgccaactcaccggcatt
tatgatgacatgctaattgatgcaccctcgttttataccattgctcccagcttgcgcgaa
tggcttggtgaagattgcttggtagcccacaatgcgcgatttgacgccagctttttgcgc
aacgaattcaaacgtgtcggtatcaactaccagccgcagctgcgctgcacactgcgcatt
tcccgccgtttaatgcctgaactgcctaagcacaatctccgaagcttattggctcacttc
aatattcatcaagcccgccagcaccgagcagaggatgatgccactgccctttggcagctg
tggaaagtctggcagcagcaatttgacgctgccagttggcaagccgcccttgctgatgaa
caacgccaccgcagcctacccgcccacttagccagcgaacagctaactgggctgcctgcc
tcgcctggggtttatttgttttatggccacaaccgccttccgctgtacgttggcaaaagc
attaatttacgcagccgagttcttggccatttccaacgcgaccaccaagacgacaaagaa
atgcgccttgtccagcaaatacagcatattgaatgggaggaaacccctggcgacttaagc
gcccagctaagagaagctgaactggttaaagagctgatgccgattatgaatcgccaactg
cgccgtcaggggcatttaaaaacatggtactggccaactgaccaaccttgcccaacgctg
gtcagcggcaaggcgatcagccagcctcagtcgggaaagctgtttgggctgtttcgcagc
gccaaagaagctaaagctgcgctacgcagtattgccgaaacacatcagctttgcccgcaa
gtgctaggaatagataaaggaacaggacggtgttttgctaaccagttaggcaaatgtaga
ggcgcctgctgtggacaggagccccttgaaagccactcacagcgcgcccaagaagcacta
gcatcttttcaagtcaacacatggccttggccaggccgcattattattcgcgagaaaagc
cgtaaaaacggcccaaccagccatcatgtaatcgaccactggtgctatttaggcagcgcc
acaaccaaacagcgtgcccttgggctaaaaggcgtcgctgccaaatttgatgtagatacc
tatcgcattctaaaccgctttttacgtgaaccagagcgacacaacctgacaatatcgccg
ctctaa

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