Halomonas qaidamensis: K1Y77_08555
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Entry
K1Y77_08555 CDS
T08648
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hqd
Halomonas qaidamensis
Pathway
hqd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K1Y77_08555 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hqd03400
]
K1Y77_08555 (ruvB)
Enzymes [BR:
hqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1Y77_08555 (ruvB)
DNA repair and recombination proteins [BR:
hqd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K1Y77_08555 (ruvB)
RecFOR pathway proteins
K1Y77_08555 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_16
TIP49
nSTAND3
AAA_14
AAA_17
Rad17
RNA_helicase
ABC_tran
AAA_18
AAA_28
AAA_24
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UYV20679
LinkDB
All DBs
Position
complement(1844286..1845323)
Genome browser
AA seq
345 aa
AA seq
DB search
MLEHDRLIAAQPEHGEGRIDHAIRPKHLKDYIGQPRVREQLEIFMGAAKLRQESLDHTLV
FGPPGLGKTTLANIIATEMGVGLKSTSGPVLERAGDLAAMLTNLEPGDVLFIDEIHRLSP
VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPRFTLVGATTRAGLLTSPLRDRFGIVQR
LEFYNLEELTEIVTRSARLLGVETSYEGAVEVARRSRGTPRIANRLLRRVRDYAEIKGNG
IVDVTLADAALNMLNVDHHGLDHMDRRLLLAMIDKFDGGPVGVDSISAAISEERGTIEDV
IEPYLIQQGLMMRTPRGRVVTRQAWLHFNKTPHENAIDPEGERRP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacatgaccgattaattgcagcacagcccgagcacggggaagggcgtattgat
catgcgattcgtcctaaacatctcaaggattatattgggcaaccacgcgtacgtgagcag
ctcgaaatcttcatgggggctgcaaaactacgtcaggaaagcctagatcataccttggta
tttggcccgccagggcttggtaaaacaacgcttgctaatattattgctactgagatgggg
gtagggctgaaatcaacttctggccccgtgcttgagcgtgcaggtgatttggcagccatg
ctgacaaatctagaacccggtgatgtactgtttattgatgaaattcatcgcctgtcccct
gtggtagaggaagtactgtacccggcgatggaagattttcagttagacattatgattggc
gaggggccagcagcccgttcaatcaagctcgatttgcctcgttttaccttggtgggcgcg
acaacgcgcgcaggcctactaacttcccccctacgtgaccgctttggcattgtacagcgg
ctggagttttacaatctcgaagaacttactgagattgtcacgcgctcggctcgcttgctt
ggtgtagaaaccagctatgaaggagcagtagaagtcgcacgacgctcaagagggacccct
cgtatcgccaatagactgctgcgtcgggtgcgtgactacgcagaaataaagggcaatggc
atcgttgatgtaacgctcgccgatgcagcccttaatatgctaaatgtcgatcaccatggg
ctggatcatatggatcggcgccttttactggcaatgatcgataaatttgatggcggccct
gtcggggtagattcgatttcagcggctatcagtgaagagcgcggcaccattgaagatgtc
atcgagccttacttgatccagcaaggactaatgatgcgcacaccaagaggacgtgtagtg
acgcgacaagcatggttacacttcaataaaacgcctcacgagaatgctattgacccagag
ggagagcgtcgcccatga
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